Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 CRYGEP-201ENST00000412192 528 ntBASIC18.21■□□□□ 0.51
VSTM1Q6UX27 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.21■□□□□ 0.51
VSTM1Q6UX27 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
VSTM1Q6UX27 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
VSTM1Q6UX27 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
VSTM1Q6UX27 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.21■□□□□ 0.5
VSTM1Q6UX27 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.21■□□□□ 0.5
VSTM1Q6UX27 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 MRPL20P1-201ENST00000400819 433 ntBASIC18.2■□□□□ 0.5
VSTM1Q6UX27 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 VN2R19P-201ENST00000442399 1052 ntBASIC18.2■□□□□ 0.5
VSTM1Q6UX27 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 AC064836.3-201ENST00000607928 673 ntBASIC18.2■□□□□ 0.5
VSTM1Q6UX27 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
VSTM1Q6UX27 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 AC007967.2-201ENST00000432613 625 ntBASIC18.19■□□□□ 0.5
VSTM1Q6UX27 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 MIR4751-201ENST00000578027 74 ntBASIC18.19■□□□□ 0.5
VSTM1Q6UX27 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 AC010654.1-201ENST00000615722 808 ntBASIC18.19■□□□□ 0.5
VSTM1Q6UX27 AC004790.2-201ENST00000623588 572 ntBASIC18.19■□□□□ 0.5
VSTM1Q6UX27 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 AC090340.1-201ENST00000620778 4980 ntBASIC18.19■□□□□ 0.5
VSTM1Q6UX27 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VSTM1Q6UX27 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms