Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 AL121761.2-201ENST00000598007 1648 ntBASIC18.2■□□□□ 0.5
DCLRE1AQ6PJP8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 AC105339.1-204ENST00000636249 355 ntBASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DCLRE1AQ6PJP8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 HMGA1P7-201ENST00000406908 502 ntBASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 FAM8A3P-201ENST00000427218 844 ntBASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 AL513210.1-201ENST00000629608 234 ntBASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 AL353732.1-201ENST00000569618 1459 ntBASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 AC012569.1-201ENST00000591191 1524 ntBASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
DCLRE1AQ6PJP8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.17■□□□□ 0.5
DCLRE1AQ6PJP8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
DCLRE1AQ6PJP8 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms