Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 AC141586.3-201ENST00000562166 1838 ntBASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 MIR33B-201ENST00000385104 96 ntBASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 YBX1P6-201ENST00000442962 1002 ntBASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 SLC25A47P1-201ENST00000531577 414 ntBASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 ACTG1P17-201ENST00000558391 1119 ntBASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 AC005412.3-201ENST00000580309 715 ntBASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 SRD5A3P1-201ENST00000603021 949 ntBASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PRPF38BQ5VTL8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 AL080243.2-201ENST00000418783 582 ntBASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 AL138918.1-201ENST00000568306 659 ntBASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 AC244452.3-201ENST00000636814 210 ntBASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.34■□□□□ 0.53
PRPF38BQ5VTL8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRPF38BQ5VTL8 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PRPF38BQ5VTL8 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
PRPF38BQ5VTL8 TCF3P1-201ENST00000423021 1937 ntBASIC18.33■□□□□ 0.53
PRPF38BQ5VTL8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.33■□□□□ 0.53
PRPF38BQ5VTL8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRPF38BQ5VTL8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
PRPF38BQ5VTL8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.33■□□□□ 0.53
PRPF38BQ5VTL8 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PRPF38BQ5VTL8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRPF38BQ5VTL8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPF38BQ5VTL8 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
PRPF38BQ5VTL8 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRPF38BQ5VTL8 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRPF38BQ5VTL8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPF38BQ5VTL8 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PRPF38BQ5VTL8 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRPF38BQ5VTL8 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.33■□□□□ 0.52
PRPF38BQ5VTL8 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PRPF38BQ5VTL8 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.33■□□□□ 0.52
PRPF38BQ5VTL8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
PRPF38BQ5VTL8 AC023310.3-201ENST00000557027 670 ntBASIC18.33■□□□□ 0.52
PRPF38BQ5VTL8 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.33■□□□□ 0.52
PRPF38BQ5VTL8 AC100756.1-201ENST00000562736 682 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms