Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.75■□□□□ 0.43
LRRC38Q5VT99 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 UPK3BP1-201ENST00000428678 509 ntBASIC17.74■□□□□ 0.43
LRRC38Q5VT99 HLA-J-202ENST00000469281 1241 ntBASIC17.74■□□□□ 0.43
LRRC38Q5VT99 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 MIR3652-201ENST00000579335 131 ntBASIC17.74■□□□□ 0.43
LRRC38Q5VT99 AC064862.7-201ENST00000604520 867 ntBASIC17.74■□□□□ 0.43
LRRC38Q5VT99 AL139424.1-201ENST00000607572 797 ntBASIC17.74■□□□□ 0.43
LRRC38Q5VT99 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 AL121772.3-201ENST00000610840 674 ntBASIC17.74■□□□□ 0.43
LRRC38Q5VT99 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
LRRC38Q5VT99 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 KRT18P31-201ENST00000506277 1292 ntBASIC17.73■□□□□ 0.43
LRRC38Q5VT99 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 AC013467.2-201ENST00000605472 835 ntBASIC17.73■□□□□ 0.43
LRRC38Q5VT99 AL732292.2-201ENST00000609649 430 ntBASIC17.73■□□□□ 0.43
LRRC38Q5VT99 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 AL139011.1-202ENST00000642063 584 ntBASIC17.73■□□□□ 0.43
LRRC38Q5VT99 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LRRC38Q5VT99 AC092171.3-201ENST00000610122 2651 ntBASIC17.73■□□□□ 0.43
LRRC38Q5VT99 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 TSPY19P-201ENST00000418461 509 ntBASIC17.72■□□□□ 0.43
LRRC38Q5VT99 TSPY18P-201ENST00000441642 509 ntBASIC17.72■□□□□ 0.43
LRRC38Q5VT99 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 MTDHP3-201ENST00000594186 672 ntBASIC17.72■□□□□ 0.43
LRRC38Q5VT99 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC38Q5VT99 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms