Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SGO1Q5FBB7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 FLJ38576-201ENST00000623820 2459 ntBASIC16.67■□□□□ 0.26
SGO1Q5FBB7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 AC003669.1-201ENST00000334569 611 ntBASIC16.67■□□□□ 0.26
SGO1Q5FBB7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 IGHV3-47-201ENST00000425060 335 ntBASIC16.67■□□□□ 0.26
SGO1Q5FBB7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 MIR3180-1-201ENST00000580374 94 ntBASIC16.67■□□□□ 0.26
SGO1Q5FBB7 MIR3180-3-201ENST00000584616 94 ntBASIC16.67■□□□□ 0.26
SGO1Q5FBB7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 AL445228.2-201ENST00000605589 952 ntBASIC16.67■□□□□ 0.26
SGO1Q5FBB7 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 AD001527.2-201ENST00000622994 785 ntBASIC16.67■□□□□ 0.26
SGO1Q5FBB7 AC093458.2-201ENST00000623150 629 ntBASIC16.67■□□□□ 0.26
SGO1Q5FBB7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SGO1Q5FBB7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 INTS4P1-201ENST00000438455 1935 ntBASIC16.66■□□□□ 0.26
SGO1Q5FBB7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 PCDHA14-201ENST00000506751 2298 ntBASIC16.66■□□□□ 0.26
SGO1Q5FBB7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 AC099336.1-202ENST00000602961 463 ntBASIC16.66■□□□□ 0.26
SGO1Q5FBB7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SGO1Q5FBB7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms