Protein–RNA interactions for Protein: Q59H18

TNNI3K, Serine/threonine-protein kinase TNNI3K, humanhuman

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI3KQ59H18 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 YBX2P1-201ENST00000394192 760 ntBASIC20.79■□□□□ 0.92
TNNI3KQ59H18 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 PDPK2P-202ENST00000562415 1191 ntBASIC20.79■□□□□ 0.92
TNNI3KQ59H18 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 AC007064.4-201ENST00000637740 555 ntBASIC20.79■□□□□ 0.92
TNNI3KQ59H18 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 AL021920.2-201ENST00000624828 1351 ntBASIC20.79■□□□□ 0.92
TNNI3KQ59H18 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 SLC22A20-204ENST00000530038 1673 ntBASIC20.79■□□□□ 0.92
TNNI3KQ59H18 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TNNI3KQ59H18 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 AC012313.1-201ENST00000593393 3059 ntBASIC20.78■□□□□ 0.92
TNNI3KQ59H18 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 BX842568.4-201ENST00000421222 227 ntBASIC20.78■□□□□ 0.92
TNNI3KQ59H18 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 AC005412.3-201ENST00000580309 715 ntBASIC20.78■□□□□ 0.92
TNNI3KQ59H18 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 HTR7P1-202ENST00000624664 4411 ntBASIC20.78■□□□□ 0.92
TNNI3KQ59H18 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
TNNI3KQ59H18 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 AL353732.1-201ENST00000569618 1459 ntBASIC20.77■□□□□ 0.92
TNNI3KQ59H18 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TNNI3KQ59H18 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
TNNI3KQ59H18 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TNNI3KQ59H18 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TNNI3KQ59H18 AL121761.2-201ENST00000598007 1648 ntBASIC20.76■□□□□ 0.91
TNNI3KQ59H18 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms