Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RSPO4Q2I0M5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 SNX29P1-201ENST00000548357 1007 ntBASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RSPO4Q2I0M5 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 RARRES2P9-201ENST00000565168 469 ntBASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 AL844908.2-201ENST00000609461 460 ntBASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 AC007431.3-201ENST00000623221 587 ntBASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 AC012569.1-201ENST00000591191 1524 ntBASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RSPO4Q2I0M5 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 AC020907.1-201ENST00000616460 1350 ntBASIC16.42■□□□□ 0.22
RSPO4Q2I0M5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms