Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 AL596087.1-201ENST00000400979 1969 ntBASIC17.9■□□□□ 0.46
CBX1P83916 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.9■□□□□ 0.46
CBX1P83916 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.9■□□□□ 0.46
CBX1P83916 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CBX1P83916 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CBX1P83916 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
CBX1P83916 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 SLC25A1P3-201ENST00000395415 828 ntBASIC17.9■□□□□ 0.46
CBX1P83916 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.9■□□□□ 0.46
CBX1P83916 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CBX1P83916 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CBX1P83916 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.9■□□□□ 0.46
CBX1P83916 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.9■□□□□ 0.46
CBX1P83916 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.9■□□□□ 0.46
CBX1P83916 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CBX1P83916 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
CBX1P83916 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.46
CBX1P83916 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CBX1P83916 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CBX1P83916 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CBX1P83916 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CBX1P83916 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CBX1P83916 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CBX1P83916 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.89■□□□□ 0.45
CBX1P83916 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC17.89■□□□□ 0.45
CBX1P83916 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.89■□□□□ 0.45
CBX1P83916 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.89■□□□□ 0.45
CBX1P83916 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.89■□□□□ 0.45
CBX1P83916 HLA-A-209ENST00000638375 975 ntBASIC17.89■□□□□ 0.45
CBX1P83916 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CBX1P83916 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.89■□□□□ 0.45
CBX1P83916 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.89■□□□□ 0.45
CBX1P83916 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.89■□□□□ 0.45
CBX1P83916 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.89■□□□□ 0.45
CBX1P83916 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.89■□□□□ 0.45
CBX1P83916 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.89■□□□□ 0.45
CBX1P83916 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.89■□□□□ 0.45
CBX1P83916 AC093525.9-201ENST00000624961 1746 ntBASIC17.89■□□□□ 0.45
CBX1P83916 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CBX1P83916 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CBX1P83916 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 AL163051.1-201ENST00000569214 1512 ntBASIC17.88■□□□□ 0.45
CBX1P83916 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.88■□□□□ 0.45
CBX1P83916 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.88■□□□□ 0.45
CBX1P83916 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 AL109659.2-201ENST00000606809 1674 ntBASIC17.88■□□□□ 0.45
CBX1P83916 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 MIR149-201ENST00000384879 89 ntBASIC17.88■□□□□ 0.45
CBX1P83916 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.88■□□□□ 0.45
CBX1P83916 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CBX1P83916 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.88■□□□□ 0.45
CBX1P83916 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CBX1P83916 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.88■□□□□ 0.45
CBX1P83916 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC17.88■□□□□ 0.45
CBX1P83916 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CBX1P83916 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.88■□□□□ 0.45
CBX1P83916 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CBX1P83916 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CBX1P83916 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.88■□□□□ 0.45
CBX1P83916 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CBX1P83916 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CBX1P83916 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CBX1P83916 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
CBX1P83916 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms