Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RAE1P78406 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.21■□□□□ 0.19
RAE1P78406 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RAE1P78406 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RAE1P78406 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.2■□□□□ 0.18
RAE1P78406 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RAE1P78406 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.2■□□□□ 0.18
RAE1P78406 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.2■□□□□ 0.18
RAE1P78406 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.2■□□□□ 0.18
RAE1P78406 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.2■□□□□ 0.18
RAE1P78406 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RAE1P78406 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.2■□□□□ 0.18
RAE1P78406 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.2■□□□□ 0.18
RAE1P78406 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.2■□□□□ 0.18
RAE1P78406 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.2■□□□□ 0.18
RAE1P78406 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.2■□□□□ 0.18
RAE1P78406 CLEC4GP1-201ENST00000596555 870 ntBASIC16.2■□□□□ 0.18
RAE1P78406 AC025062.2-201ENST00000605477 670 ntBASIC16.2■□□□□ 0.18
RAE1P78406 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.2■□□□□ 0.18
RAE1P78406 AC004706.3-202ENST00000621574 984 ntBASIC16.2■□□□□ 0.18
RAE1P78406 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
RAE1P78406 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.2■□□□□ 0.18
RAE1P78406 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 AL391256.1-201ENST00000443260 1855 ntBASIC16.2■□□□□ 0.18
RAE1P78406 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
RAE1P78406 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RAE1P78406 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RAE1P78406 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RAE1P78406 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAE1P78406 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAE1P78406 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.19■□□□□ 0.18
RAE1P78406 TNRC18P3-201ENST00000441896 2691 ntBASIC16.19■□□□□ 0.18
RAE1P78406 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.19■□□□□ 0.18
RAE1P78406 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAE1P78406 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.19■□□□□ 0.18
RAE1P78406 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAE1P78406 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.19■□□□□ 0.18
RAE1P78406 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAE1P78406 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.19■□□□□ 0.18
RAE1P78406 AL021920.2-201ENST00000624828 1351 ntBASIC16.19■□□□□ 0.18
RAE1P78406 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAE1P78406 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.19■□□□□ 0.18
RAE1P78406 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.19■□□□□ 0.18
RAE1P78406 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAE1P78406 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.19■□□□□ 0.18
RAE1P78406 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAE1P78406 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.19■□□□□ 0.18
RAE1P78406 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAE1P78406 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAE1P78406 SAPCD2P3-201ENST00000455031 850 ntBASIC16.19■□□□□ 0.18
RAE1P78406 AP002490.2-201ENST00000524791 560 ntBASIC16.19■□□□□ 0.18
RAE1P78406 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAE1P78406 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.19■□□□□ 0.18
RAE1P78406 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.19■□□□□ 0.18
RAE1P78406 AC021087.4-201ENST00000563761 564 ntBASIC16.19■□□□□ 0.18
RAE1P78406 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.19■□□□□ 0.18
RAE1P78406 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
RAE1P78406 AC139887.3-201ENST00000568585 713 ntBASIC16.19■□□□□ 0.18
RAE1P78406 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.19■□□□□ 0.18
RAE1P78406 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.19■□□□□ 0.18
RAE1P78406 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RAE1P78406 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAE1P78406 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RAE1P78406 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RAE1P78406 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.19■□□□□ 0.18
RAE1P78406 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAE1P78406 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RAE1P78406 KRT8P49-201ENST00000604166 1432 ntBASIC16.19■□□□□ 0.18
RAE1P78406 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.18■□□□□ 0.18
RAE1P78406 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAE1P78406 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RAE1P78406 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAE1P78406 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
RAE1P78406 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAE1P78406 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAE1P78406 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RAE1P78406 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RAE1P78406 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
RAE1P78406 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.18■□□□□ 0.18
RAE1P78406 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms