Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC133963.1-201ENST00000504166 1679 ntBASIC19.34■□□□□ 0.69
CCNA1P78396 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNA1P78396 AC104581.1-202ENST00000635932 2618 ntBASIC19.34■□□□□ 0.69
CCNA1P78396 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNA1P78396 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNA1P78396 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNA1P78396 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNA1P78396 METTL26-204ENST00000397665 558 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNA1P78396 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNA1P78396 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.34■□□□□ 0.69
CCNA1P78396 SLC25A6P5-201ENST00000435663 894 ntBASIC19.34■□□□□ 0.69
CCNA1P78396 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNA1P78396 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCNA1P78396 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNA1P78396 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.34■□□□□ 0.69
CCNA1P78396 AP000842.3-202ENST00000569238 1080 ntBASIC19.34■□□□□ 0.69
CCNA1P78396 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCNA1P78396 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.34■□□□□ 0.69
CCNA1P78396 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CCNA1P78396 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CCNA1P78396 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNA1P78396 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCNA1P78396 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCNA1P78396 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNA1P78396 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.34■□□□□ 0.69
CCNA1P78396 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
CCNA1P78396 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.34■□□□□ 0.69
CCNA1P78396 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNA1P78396 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCNA1P78396 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCNA1P78396 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCNA1P78396 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.33■□□□□ 0.69
CCNA1P78396 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
CCNA1P78396 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CCNA1P78396 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCNA1P78396 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCNA1P78396 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.33■□□□□ 0.69
CCNA1P78396 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCNA1P78396 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
CCNA1P78396 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
CCNA1P78396 MIR346-201ENST00000362234 95 ntBASIC19.33■□□□□ 0.68
CCNA1P78396 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.33■□□□□ 0.68
CCNA1P78396 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC19.33■□□□□ 0.68
CCNA1P78396 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.33■□□□□ 0.68
CCNA1P78396 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCNA1P78396 AL035252.4-201ENST00000624174 288 ntBASIC19.33■□□□□ 0.68
CCNA1P78396 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCNA1P78396 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCNA1P78396 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.33■□□□□ 0.68
CCNA1P78396 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCNA1P78396 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.33■□□□□ 0.68
CCNA1P78396 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCNA1P78396 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.33■□□□□ 0.68
CCNA1P78396 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.33■□□□□ 0.68
CCNA1P78396 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.32■□□□□ 0.68
CCNA1P78396 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
CCNA1P78396 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
CCNA1P78396 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.32■□□□□ 0.68
CCNA1P78396 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.32■□□□□ 0.68
CCNA1P78396 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.32■□□□□ 0.68
CCNA1P78396 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
CCNA1P78396 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC19.32■□□□□ 0.68
CCNA1P78396 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.32■□□□□ 0.68
CCNA1P78396 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 LINC02560-201ENST00000596379 459 ntBASIC19.32■□□□□ 0.68
CCNA1P78396 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.32■□□□□ 0.68
CCNA1P78396 AC008761.3-201ENST00000624803 892 ntBASIC19.32■□□□□ 0.68
CCNA1P78396 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.32■□□□□ 0.68
CCNA1P78396 EGFEM1P-202ENST00000431685 1563 ntBASIC19.32■□□□□ 0.68
CCNA1P78396 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCNA1P78396 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCNA1P78396 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCNA1P78396 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCNA1P78396 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CCNA1P78396 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CCNA1P78396 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.31■□□□□ 0.68
CCNA1P78396 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCNA1P78396 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.31■□□□□ 0.68
CCNA1P78396 UGT1A2P-201ENST00000454886 866 ntBASIC19.31■□□□□ 0.68
CCNA1P78396 AC097493.3-201ENST00000509725 367 ntBASIC19.31■□□□□ 0.68
CCNA1P78396 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.31■□□□□ 0.68
CCNA1P78396 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CCNA1P78396 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.31■□□□□ 0.68
CCNA1P78396 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.31■□□□□ 0.68
CCNA1P78396 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms