Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP1P78357 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNTNAP1P78357 SLC22A20-204ENST00000530038 1673 ntBASIC20.14■□□□□ 0.82
CNTNAP1P78357 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC20.14■□□□□ 0.82
CNTNAP1P78357 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CNTNAP1P78357 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CNTNAP1P78357 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.82
CNTNAP1P78357 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CNTNAP1P78357 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
CNTNAP1P78357 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CNTNAP1P78357 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC20.14■□□□□ 0.82
CNTNAP1P78357 AC007541.1-201ENST00000570282 1469 ntBASIC20.14■□□□□ 0.82
CNTNAP1P78357 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP1P78357 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP1P78357 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP1P78357 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 REXO1L6P-201ENST00000603433 1515 ntBASIC20.14■□□□□ 0.81
CNTNAP1P78357 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP1P78357 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP1P78357 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP1P78357 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP1P78357 SLC25A1P3-201ENST00000395415 828 ntBASIC20.14■□□□□ 0.81
CNTNAP1P78357 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP1P78357 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.14■□□□□ 0.81
CNTNAP1P78357 AP006294.1-201ENST00000415407 339 ntBASIC20.14■□□□□ 0.81
CNTNAP1P78357 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.14■□□□□ 0.81
CNTNAP1P78357 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 AC109635.5-201ENST00000533593 962 ntBASIC20.14■□□□□ 0.81
CNTNAP1P78357 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP1P78357 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP1P78357 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP1P78357 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 AL354751.1-201ENST00000412768 1863 ntBASIC20.14■□□□□ 0.81
CNTNAP1P78357 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP1P78357 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.14■□□□□ 0.81
CNTNAP1P78357 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP1P78357 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNTNAP1P78357 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP1P78357 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.13■□□□□ 0.81
CNTNAP1P78357 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CNTNAP1P78357 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP1P78357 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP1P78357 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.13■□□□□ 0.81
CNTNAP1P78357 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP1P78357 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP1P78357 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.13■□□□□ 0.81
CNTNAP1P78357 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.13■□□□□ 0.81
CNTNAP1P78357 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP1P78357 AC092552.1-201ENST00000547243 906 ntBASIC20.13■□□□□ 0.81
CNTNAP1P78357 SPDYE12P-201ENST00000618416 771 ntBASIC20.13■□□□□ 0.81
CNTNAP1P78357 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.13■□□□□ 0.81
CNTNAP1P78357 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP1P78357 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP1P78357 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP1P78357 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.13■□□□□ 0.81
CNTNAP1P78357 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CNTNAP1P78357 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.13■□□□□ 0.81
CNTNAP1P78357 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP1P78357 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP1P78357 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CNTNAP1P78357 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.12■□□□□ 0.81
CNTNAP1P78357 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP1P78357 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.12■□□□□ 0.81
CNTNAP1P78357 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CNTNAP1P78357 DGCR5-201ENST00000399539 862 ntBASIC20.12■□□□□ 0.81
CNTNAP1P78357 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.12■□□□□ 0.81
CNTNAP1P78357 RN7SL752P-201ENST00000463779 287 ntBASIC20.12■□□□□ 0.81
CNTNAP1P78357 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC20.12■□□□□ 0.81
CNTNAP1P78357 AC104794.3-201ENST00000566840 1248 ntBASIC20.12■□□□□ 0.81
CNTNAP1P78357 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC20.12■□□□□ 0.81
CNTNAP1P78357 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.12■□□□□ 0.81
CNTNAP1P78357 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CNTNAP1P78357 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CNTNAP1P78357 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP1P78357 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP1P78357 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.12■□□□□ 0.81
CNTNAP1P78357 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.12■□□□□ 0.81
CNTNAP1P78357 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP1P78357 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CNTNAP1P78357 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.12■□□□□ 0.81
CNTNAP1P78357 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP1P78357 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP1P78357 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP1P78357 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CNTNAP1P78357 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms