Protein–RNA interactions for Protein: P62304

SNRPE, Small nuclear ribonucleoprotein E, humanhuman

Known RBP Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPEP62304 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SNRPEP62304 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.1□□□□□ -0.31
SNRPEP62304 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 AC099343.3-201ENST00000605834 2503 ntBASIC13.1□□□□□ -0.31
SNRPEP62304 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.1□□□□□ -0.31
SNRPEP62304 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.1□□□□□ -0.31
SNRPEP62304 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SNRPEP62304 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.1□□□□□ -0.31
SNRPEP62304 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.1□□□□□ -0.31
SNRPEP62304 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SNRPEP62304 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 KRT18P41-201ENST00000518924 1277 ntBASIC13.1□□□□□ -0.31
SNRPEP62304 DUX4L19-201ENST00000557448 1267 ntBASIC13.1□□□□□ -0.31
SNRPEP62304 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SNRPEP62304 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
SNRPEP62304 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SNRPEP62304 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.1□□□□□ -0.31
SNRPEP62304 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.1□□□□□ -0.31
SNRPEP62304 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SNRPEP62304 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.1□□□□□ -0.31
SNRPEP62304 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.1□□□□□ -0.31
SNRPEP62304 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.1□□□□□ -0.31
SNRPEP62304 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
SNRPEP62304 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.1□□□□□ -0.31
SNRPEP62304 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.1□□□□□ -0.31
SNRPEP62304 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SNRPEP62304 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SNRPEP62304 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 AC099521.3-201ENST00000624251 2938 ntBASIC13.09□□□□□ -0.31
SNRPEP62304 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.09□□□□□ -0.31
SNRPEP62304 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
SNRPEP62304 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SNRPEP62304 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.09□□□□□ -0.31
SNRPEP62304 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC13.09□□□□□ -0.31
SNRPEP62304 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 AK3-203ENST00000447596 705 ntTSL 2 BASIC13.09□□□□□ -0.31
SNRPEP62304 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SNRPEP62304 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC13.09□□□□□ -0.31
SNRPEP62304 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 MFSD11-216ENST00000590393 1141 ntBASIC13.09□□□□□ -0.31
SNRPEP62304 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.09□□□□□ -0.31
SNRPEP62304 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SNRPEP62304 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SNRPEP62304 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.09□□□□□ -0.31
SNRPEP62304 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SNRPEP62304 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 KRT87P-202ENST00000534226 1464 ntBASIC13.09□□□□□ -0.31
SNRPEP62304 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SNRPEP62304 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.09□□□□□ -0.31
SNRPEP62304 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 AC006504.5-208ENST00000588784 2401 ntBASIC13.09□□□□□ -0.31
SNRPEP62304 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 AC005562.1-201ENST00000583030 3219 ntBASIC13.09□□□□□ -0.31
SNRPEP62304 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
SNRPEP62304 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SNRPEP62304 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.09□□□□□ -0.31
SNRPEP62304 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
SNRPEP62304 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.08□□□□□ -0.31
SNRPEP62304 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SNRPEP62304 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
SNRPEP62304 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SNRPEP62304 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms