Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 KRT18P22-201ENST00000402024 1347 ntBASIC15.63■□□□□ 0.09
CXCR4P61073 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CXCR4P61073 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.63■□□□□ 0.09
CXCR4P61073 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 FRMD8P1-201ENST00000440433 1524 ntBASIC15.63■□□□□ 0.09
CXCR4P61073 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CXCR4P61073 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CXCR4P61073 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
CXCR4P61073 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CXCR4P61073 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.62■□□□□ 0.09
CXCR4P61073 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.62■□□□□ 0.09
CXCR4P61073 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CXCR4P61073 COX5BP2-201ENST00000392354 334 ntBASIC15.62■□□□□ 0.09
CXCR4P61073 KRT18P48-201ENST00000434763 852 ntBASIC15.62■□□□□ 0.09
CXCR4P61073 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC15.62■□□□□ 0.09
CXCR4P61073 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CXCR4P61073 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.62■□□□□ 0.09
CXCR4P61073 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.62■□□□□ 0.09
CXCR4P61073 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.62■□□□□ 0.09
CXCR4P61073 AC079602.3-201ENST00000623931 403 ntBASIC15.62■□□□□ 0.09
CXCR4P61073 AL023973.1-201ENST00000624619 620 ntBASIC15.62■□□□□ 0.09
CXCR4P61073 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CXCR4P61073 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 AL645728.1-201ENST00000366221 2101 ntBASIC15.62■□□□□ 0.09
CXCR4P61073 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.62■□□□□ 0.09
CXCR4P61073 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.62■□□□□ 0.09
CXCR4P61073 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CXCR4P61073 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCR4P61073 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CXCR4P61073 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 ALOX12P2-203ENST00000570921 1945 ntBASIC15.61■□□□□ 0.09
CXCR4P61073 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCR4P61073 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCR4P61073 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CXCR4P61073 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CXCR4P61073 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCR4P61073 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCR4P61073 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.61■□□□□ 0.09
CXCR4P61073 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.61■□□□□ 0.09
CXCR4P61073 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CXCR4P61073 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 AC099063.4-201ENST00000641099 1602 ntBASIC15.61■□□□□ 0.09
CXCR4P61073 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCR4P61073 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.6■□□□□ 0.09
CXCR4P61073 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.6■□□□□ 0.09
CXCR4P61073 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.6■□□□□ 0.09
CXCR4P61073 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.6■□□□□ 0.09
CXCR4P61073 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CXCR4P61073 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.6■□□□□ 0.09
CXCR4P61073 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms