Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SPCS3P61009 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SPCS3P61009 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.99□□□□□ -0.17
SPCS3P61009 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
SPCS3P61009 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 LIN28AP1-201ENST00000429574 405 ntBASIC13.99□□□□□ -0.17
SPCS3P61009 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC13.99□□□□□ -0.17
SPCS3P61009 COX11P1-201ENST00000489116 835 ntBASIC13.99□□□□□ -0.17
SPCS3P61009 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.99□□□□□ -0.17
SPCS3P61009 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SPCS3P61009 GPR32P1-201ENST00000601788 811 ntBASIC13.99□□□□□ -0.17
SPCS3P61009 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SPCS3P61009 TMEM191A-211ENST00000637163 1067 ntBASIC13.99□□□□□ -0.17
SPCS3P61009 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.99□□□□□ -0.17
SPCS3P61009 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.99□□□□□ -0.17
SPCS3P61009 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.99□□□□□ -0.17
SPCS3P61009 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SPCS3P61009 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SPCS3P61009 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPCS3P61009 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SPCS3P61009 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.98□□□□□ -0.17
SPCS3P61009 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.98□□□□□ -0.17
SPCS3P61009 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.98□□□□□ -0.17
SPCS3P61009 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
SPCS3P61009 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SPCS3P61009 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
SPCS3P61009 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 SLC25A1P3-201ENST00000395415 828 ntBASIC13.98□□□□□ -0.17
SPCS3P61009 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.98□□□□□ -0.17
SPCS3P61009 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SPCS3P61009 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.98□□□□□ -0.17
SPCS3P61009 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.98□□□□□ -0.17
SPCS3P61009 AC124947.2-201ENST00000547118 1133 ntBASIC13.98□□□□□ -0.17
SPCS3P61009 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.98□□□□□ -0.17
SPCS3P61009 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SPCS3P61009 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.98□□□□□ -0.17
SPCS3P61009 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SPCS3P61009 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
SPCS3P61009 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.98□□□□□ -0.17
SPCS3P61009 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.98□□□□□ -0.17
SPCS3P61009 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SPCS3P61009 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.98□□□□□ -0.17
SPCS3P61009 AC063926.3-201ENST00000624734 5658 ntBASIC13.97□□□□□ -0.17
SPCS3P61009 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.97□□□□□ -0.17
SPCS3P61009 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SPCS3P61009 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
SPCS3P61009 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.97□□□□□ -0.17
SPCS3P61009 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.97□□□□□ -0.17
SPCS3P61009 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SPCS3P61009 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SPCS3P61009 MIR662-201ENST00000384847 95 ntBASIC13.97□□□□□ -0.17
SPCS3P61009 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SPCS3P61009 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.97□□□□□ -0.17
SPCS3P61009 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SPCS3P61009 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.97□□□□□ -0.17
SPCS3P61009 ATP5G1P1-201ENST00000448724 379 ntBASIC13.97□□□□□ -0.17
SPCS3P61009 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms