Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 AC011676.5-201ENST00000624864 2660 ntBASIC17.28■□□□□ 0.36
WNT3AP56704 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
WNT3AP56704 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
WNT3AP56704 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
WNT3AP56704 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
WNT3AP56704 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.28■□□□□ 0.36
WNT3AP56704 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.28■□□□□ 0.36
WNT3AP56704 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.28■□□□□ 0.36
WNT3AP56704 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.28■□□□□ 0.36
WNT3AP56704 HNRNPDP1-201ENST00000439535 754 ntBASIC17.28■□□□□ 0.36
WNT3AP56704 AC018712.1-201ENST00000455767 687 ntBASIC17.28■□□□□ 0.36
WNT3AP56704 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.28■□□□□ 0.36
WNT3AP56704 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.28■□□□□ 0.36
WNT3AP56704 DUX4L17-201ENST00000557360 1267 ntBASIC17.28■□□□□ 0.36
WNT3AP56704 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
WNT3AP56704 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.28■□□□□ 0.36
WNT3AP56704 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.28■□□□□ 0.36
WNT3AP56704 AC006557.2-201ENST00000592985 1240 ntBASIC17.28■□□□□ 0.36
WNT3AP56704 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 TERC-201ENST00000602385 541 ntBASIC17.28■□□□□ 0.36
WNT3AP56704 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.28■□□□□ 0.36
WNT3AP56704 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
WNT3AP56704 AL031008.1-201ENST00000619963 541 ntBASIC17.28■□□□□ 0.36
WNT3AP56704 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
WNT3AP56704 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.28■□□□□ 0.36
WNT3AP56704 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.28■□□□□ 0.36
WNT3AP56704 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
WNT3AP56704 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.28■□□□□ 0.36
WNT3AP56704 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
WNT3AP56704 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3AP56704 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.27■□□□□ 0.36
WNT3AP56704 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
WNT3AP56704 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3AP56704 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3AP56704 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3AP56704 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3AP56704 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
WNT3AP56704 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3AP56704 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3AP56704 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3AP56704 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3AP56704 PTCHD3P3-201ENST00000403073 906 ntBASIC17.27■□□□□ 0.36
WNT3AP56704 KRT18P67-201ENST00000432816 1264 ntBASIC17.27■□□□□ 0.36
WNT3AP56704 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.27■□□□□ 0.36
WNT3AP56704 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.27■□□□□ 0.36
WNT3AP56704 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.27■□□□□ 0.36
WNT3AP56704 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3AP56704 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
WNT3AP56704 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
WNT3AP56704 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3AP56704 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.27■□□□□ 0.36
WNT3AP56704 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
WNT3AP56704 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3AP56704 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3AP56704 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
WNT3AP56704 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
WNT3AP56704 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
WNT3AP56704 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
WNT3AP56704 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.27■□□□□ 0.35
WNT3AP56704 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
WNT3AP56704 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
WNT3AP56704 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
WNT3AP56704 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.27■□□□□ 0.35
WNT3AP56704 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.27■□□□□ 0.35
WNT3AP56704 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
WNT3AP56704 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
WNT3AP56704 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
WNT3AP56704 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 OR6D1P-203ENST00000641209 4860 ntBASIC17.26■□□□□ 0.35
WNT3AP56704 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
WNT3AP56704 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
WNT3AP56704 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
WNT3AP56704 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
WNT3AP56704 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
WNT3AP56704 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
WNT3AP56704 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.26■□□□□ 0.35
WNT3AP56704 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms