Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 COA5-202ENST00000409997 557 ntTSL 4 BASIC12.53□□□□□ -0.4
APOC4P55056 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.53□□□□□ -0.4
APOC4P55056 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.53□□□□□ -0.4
APOC4P55056 PAWRP1-201ENST00000451083 565 ntBASIC12.53□□□□□ -0.4
APOC4P55056 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.53□□□□□ -0.4
APOC4P55056 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC4P55056 AC087163.2-201ENST00000457299 853 ntBASIC12.53□□□□□ -0.4
APOC4P55056 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC4P55056 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.53□□□□□ -0.4
APOC4P55056 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.53□□□□□ -0.4
APOC4P55056 AC010327.4-202ENST00000591484 748 ntBASIC12.53□□□□□ -0.4
APOC4P55056 AC139530.3-201ENST00000620344 690 ntBASIC12.53□□□□□ -0.4
APOC4P55056 AC010507.1-201ENST00000633895 436 ntBASIC12.53□□□□□ -0.4
APOC4P55056 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.53□□□□□ -0.4
APOC4P55056 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
APOC4P55056 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
APOC4P55056 BCAR1-209ENST00000546196 1340 ntBASIC12.53□□□□□ -0.4
APOC4P55056 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC12.53□□□□□ -0.4
APOC4P55056 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC4P55056 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC4P55056 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
APOC4P55056 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC4P55056 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC4P55056 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
APOC4P55056 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
APOC4P55056 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC4P55056 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC4P55056 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.53□□□□□ -0.4
APOC4P55056 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
APOC4P55056 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC12.52□□□□□ -0.4
APOC4P55056 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
APOC4P55056 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC4P55056 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
APOC4P55056 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC4P55056 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC4P55056 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC4P55056 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
APOC4P55056 GNE-204ENST00000539208 2190 ntTSL 2 BASIC12.52□□□□□ -0.4
APOC4P55056 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
APOC4P55056 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC4P55056 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
APOC4P55056 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC4P55056 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC4P55056 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC4P55056 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC4P55056 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC4P55056 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC12.52□□□□□ -0.41
APOC4P55056 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC4P55056 MCCD1P2-201ENST00000423228 335 ntBASIC12.52□□□□□ -0.41
APOC4P55056 GPX1P2-201ENST00000429271 606 ntBASIC12.52□□□□□ -0.41
APOC4P55056 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.52□□□□□ -0.41
APOC4P55056 AL513480.1-201ENST00000451731 511 ntBASIC12.52□□□□□ -0.41
APOC4P55056 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.52□□□□□ -0.41
APOC4P55056 AC018845.2-201ENST00000568326 409 ntBASIC12.52□□□□□ -0.41
APOC4P55056 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC4P55056 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC4P55056 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC4P55056 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.52□□□□□ -0.41
APOC4P55056 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC4P55056 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.52□□□□□ -0.41
APOC4P55056 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
APOC4P55056 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.52□□□□□ -0.41
APOC4P55056 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC12.52□□□□□ -0.41
APOC4P55056 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC4P55056 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC4P55056 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
APOC4P55056 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC4P55056 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC4P55056 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.52□□□□□ -0.41
APOC4P55056 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
APOC4P55056 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
APOC4P55056 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
APOC4P55056 AC134043.2-201ENST00000624206 2238 ntBASIC12.52□□□□□ -0.41
APOC4P55056 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
APOC4P55056 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC12.51□□□□□ -0.41
APOC4P55056 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.51□□□□□ -0.41
APOC4P55056 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
APOC4P55056 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
APOC4P55056 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC12.51□□□□□ -0.41
APOC4P55056 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC12.51□□□□□ -0.41
APOC4P55056 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.51□□□□□ -0.41
APOC4P55056 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
APOC4P55056 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 KRT18P2-201ENST00000447938 1258 ntBASIC12.51□□□□□ -0.41
APOC4P55056 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.51□□□□□ -0.41
APOC4P55056 PDPK2P-202ENST00000562415 1191 ntBASIC12.51□□□□□ -0.41
APOC4P55056 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.51□□□□□ -0.41
APOC4P55056 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.51□□□□□ -0.41
APOC4P55056 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC12.51□□□□□ -0.41
APOC4P55056 AC004877.2-201ENST00000623941 599 ntBASIC12.51□□□□□ -0.41
APOC4P55056 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms