Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
EPHB4P54760 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
EPHB4P54760 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB4P54760 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB4P54760 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB4P54760 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB4P54760 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB4P54760 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB4P54760 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB4P54760 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
EPHB4P54760 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB4P54760 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
EPHB4P54760 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
EPHB4P54760 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
EPHB4P54760 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.23■□□□□ 0.67
EPHB4P54760 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.23■□□□□ 0.67
EPHB4P54760 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.23■□□□□ 0.67
EPHB4P54760 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.23■□□□□ 0.67
EPHB4P54760 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB4P54760 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.23■□□□□ 0.67
EPHB4P54760 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.23■□□□□ 0.67
EPHB4P54760 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.23■□□□□ 0.67
EPHB4P54760 AC093520.2-201ENST00000561830 333 ntBASIC19.23■□□□□ 0.67
EPHB4P54760 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.23■□□□□ 0.67
EPHB4P54760 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.23■□□□□ 0.67
EPHB4P54760 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB4P54760 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.23■□□□□ 0.67
EPHB4P54760 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB4P54760 NCF1C-201ENST00000438382 1427 ntBASIC19.23■□□□□ 0.67
EPHB4P54760 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.23■□□□□ 0.67
EPHB4P54760 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB4P54760 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
EPHB4P54760 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
EPHB4P54760 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC19.22■□□□□ 0.67
EPHB4P54760 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
EPHB4P54760 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
EPHB4P54760 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB4P54760 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB4P54760 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.22■□□□□ 0.67
EPHB4P54760 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB4P54760 MRPL20P1-201ENST00000400819 433 ntBASIC19.22■□□□□ 0.67
EPHB4P54760 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC19.22■□□□□ 0.67
EPHB4P54760 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.22■□□□□ 0.67
EPHB4P54760 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB4P54760 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.22■□□□□ 0.67
EPHB4P54760 AC190387.1-201ENST00000551683 408 ntBASIC19.22■□□□□ 0.67
EPHB4P54760 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.22■□□□□ 0.67
EPHB4P54760 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB4P54760 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB4P54760 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.22■□□□□ 0.67
EPHB4P54760 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.22■□□□□ 0.67
EPHB4P54760 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.22■□□□□ 0.67
EPHB4P54760 TNRC18P3-201ENST00000441896 2691 ntBASIC19.22■□□□□ 0.67
EPHB4P54760 AD000864.1-201ENST00000624076 2295 ntBASIC19.22■□□□□ 0.67
EPHB4P54760 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB4P54760 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB4P54760 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB4P54760 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB4P54760 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
EPHB4P54760 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.22■□□□□ 0.67
EPHB4P54760 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB4P54760 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB4P54760 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
EPHB4P54760 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.21■□□□□ 0.67
EPHB4P54760 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.21■□□□□ 0.67
EPHB4P54760 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
EPHB4P54760 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
EPHB4P54760 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
EPHB4P54760 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.21■□□□□ 0.67
EPHB4P54760 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.21■□□□□ 0.67
EPHB4P54760 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
EPHB4P54760 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC19.21■□□□□ 0.67
EPHB4P54760 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.21■□□□□ 0.67
EPHB4P54760 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.21■□□□□ 0.67
EPHB4P54760 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.21■□□□□ 0.67
EPHB4P54760 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC19.21■□□□□ 0.67
EPHB4P54760 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
EPHB4P54760 AC025678.2-201ENST00000562061 970 ntBASIC19.21■□□□□ 0.67
EPHB4P54760 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC19.21■□□□□ 0.67
EPHB4P54760 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.21■□□□□ 0.67
EPHB4P54760 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 Z92544.3-201ENST00000624747 417 ntBASIC19.21■□□□□ 0.67
EPHB4P54760 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
EPHB4P54760 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.21■□□□□ 0.67
EPHB4P54760 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
EPHB4P54760 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms