Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 PIN1P1-201ENST00000412108 996 ntBASIC16.87■□□□□ 0.29
LIMK1P53667 COX5BP8-201ENST00000416911 349 ntBASIC16.87■□□□□ 0.29
LIMK1P53667 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.87■□□□□ 0.29
LIMK1P53667 TREML5P-201ENST00000421694 576 ntBASIC16.87■□□□□ 0.29
LIMK1P53667 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.87■□□□□ 0.29
LIMK1P53667 AC140658.5-201ENST00000438532 169 ntBASIC16.87■□□□□ 0.29
LIMK1P53667 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.87■□□□□ 0.29
LIMK1P53667 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
LIMK1P53667 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.87■□□□□ 0.29
LIMK1P53667 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.87■□□□□ 0.29
LIMK1P53667 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.87■□□□□ 0.29
LIMK1P53667 DUTP2-201ENST00000519164 463 ntBASIC16.87■□□□□ 0.29
LIMK1P53667 IGHV3-42-201ENST00000520410 361 ntBASIC16.87■□□□□ 0.29
LIMK1P53667 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK1P53667 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.87■□□□□ 0.29
LIMK1P53667 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK1P53667 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK1P53667 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.87■□□□□ 0.29
LIMK1P53667 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
LIMK1P53667 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK1P53667 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LIMK1P53667 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK1P53667 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK1P53667 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.86■□□□□ 0.29
LIMK1P53667 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.86■□□□□ 0.29
LIMK1P53667 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK1P53667 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LIMK1P53667 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.86■□□□□ 0.29
LIMK1P53667 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
LIMK1P53667 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK1P53667 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK1P53667 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK1P53667 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK1P53667 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.86■□□□□ 0.29
LIMK1P53667 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.86■□□□□ 0.29
LIMK1P53667 ATP5G2P4-201ENST00000442175 420 ntBASIC16.86■□□□□ 0.29
LIMK1P53667 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.86■□□□□ 0.29
LIMK1P53667 AL662799.1-202ENST00000614205 422 ntBASIC16.86■□□□□ 0.29
LIMK1P53667 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
LIMK1P53667 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK1P53667 AKAP8P1-201ENST00000434743 1349 ntBASIC16.86■□□□□ 0.29
LIMK1P53667 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LIMK1P53667 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK1P53667 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LIMK1P53667 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LIMK1P53667 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LIMK1P53667 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
LIMK1P53667 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LIMK1P53667 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 AC009336.1-201ENST00000608941 1553 ntBASIC16.85■□□□□ 0.29
LIMK1P53667 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.85■□□□□ 0.29
LIMK1P53667 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.85■□□□□ 0.29
LIMK1P53667 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LIMK1P53667 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
LIMK1P53667 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
LIMK1P53667 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.85■□□□□ 0.29
LIMK1P53667 RBPMS2P1-201ENST00000437762 623 ntBASIC16.85■□□□□ 0.29
LIMK1P53667 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.85■□□□□ 0.29
LIMK1P53667 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.85■□□□□ 0.29
LIMK1P53667 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.85■□□□□ 0.29
LIMK1P53667 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LIMK1P53667 AC243562.1-201ENST00000560672 389 ntBASIC16.85■□□□□ 0.29
LIMK1P53667 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.85■□□□□ 0.29
LIMK1P53667 AC109462.3-201ENST00000573934 613 ntBASIC16.85■□□□□ 0.29
LIMK1P53667 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LIMK1P53667 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LIMK1P53667 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LIMK1P53667 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK1P53667 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK1P53667 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK1P53667 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK1P53667 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LIMK1P53667 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.84■□□□□ 0.29
LIMK1P53667 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LIMK1P53667 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK1P53667 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK1P53667 AC012317.2-201ENST00000623305 2251 ntBASIC16.84■□□□□ 0.29
LIMK1P53667 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LIMK1P53667 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK1P53667 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK1P53667 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LIMK1P53667 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms