Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.68■□□□□ 0.58
ACLYP53396 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ACLYP53396 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACLYP53396 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ACLYP53396 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.68■□□□□ 0.58
ACLYP53396 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACLYP53396 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACLYP53396 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ACLYP53396 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACLYP53396 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ACLYP53396 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.68■□□□□ 0.58
ACLYP53396 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ACLYP53396 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.68■□□□□ 0.58
ACLYP53396 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ACLYP53396 AP3S2-216ENST00000617003 1561 ntBASIC18.68■□□□□ 0.58
ACLYP53396 AC104581.1-202ENST00000635932 2618 ntBASIC18.68■□□□□ 0.58
ACLYP53396 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACLYP53396 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACLYP53396 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ACLYP53396 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ACLYP53396 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACLYP53396 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ACLYP53396 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
ACLYP53396 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACLYP53396 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.67■□□□□ 0.58
ACLYP53396 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
ACLYP53396 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACLYP53396 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ACLYP53396 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACLYP53396 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ACLYP53396 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ACLYP53396 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.67■□□□□ 0.58
ACLYP53396 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.67■□□□□ 0.58
ACLYP53396 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACLYP53396 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.67■□□□□ 0.58
ACLYP53396 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.67■□□□□ 0.58
ACLYP53396 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.67■□□□□ 0.58
ACLYP53396 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.67■□□□□ 0.58
ACLYP53396 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
ACLYP53396 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.67■□□□□ 0.58
ACLYP53396 AL359881.2-201ENST00000602973 570 ntBASIC18.67■□□□□ 0.58
ACLYP53396 AC007967.4-201ENST00000614700 386 ntBASIC18.67■□□□□ 0.58
ACLYP53396 AL138828.2-201ENST00000615812 383 ntBASIC18.67■□□□□ 0.58
ACLYP53396 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ACLYP53396 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ACLYP53396 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.67■□□□□ 0.58
ACLYP53396 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ACLYP53396 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ACLYP53396 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.67■□□□□ 0.58
ACLYP53396 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.67■□□□□ 0.58
ACLYP53396 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.67■□□□□ 0.58
ACLYP53396 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.67■□□□□ 0.58
ACLYP53396 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACLYP53396 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACLYP53396 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.66■□□□□ 0.58
ACLYP53396 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.66■□□□□ 0.58
ACLYP53396 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.66■□□□□ 0.58
ACLYP53396 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
ACLYP53396 AC131009.4-201ENST00000624048 1740 ntBASIC18.66■□□□□ 0.58
ACLYP53396 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACLYP53396 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACLYP53396 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ACLYP53396 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.66■□□□□ 0.58
ACLYP53396 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.66■□□□□ 0.58
ACLYP53396 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACLYP53396 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACLYP53396 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACLYP53396 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACLYP53396 SPTLC1P1-201ENST00000447199 261 ntBASIC18.66■□□□□ 0.58
ACLYP53396 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACLYP53396 AC105233.2-201ENST00000523697 349 ntBASIC18.66■□□□□ 0.58
ACLYP53396 AF228730.5-201ENST00000530288 346 ntBASIC18.66■□□□□ 0.58
ACLYP53396 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.66■□□□□ 0.58
ACLYP53396 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACLYP53396 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACLYP53396 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
ACLYP53396 AC009113.1-201ENST00000570267 2443 ntBASIC18.66■□□□□ 0.58
ACLYP53396 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
ACLYP53396 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ACLYP53396 ABALON-201ENST00000629058 1903 ntBASIC18.66■□□□□ 0.58
ACLYP53396 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACLYP53396 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ACLYP53396 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACLYP53396 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.66■□□□□ 0.58
ACLYP53396 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ACLYP53396 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ACLYP53396 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.65■□□□□ 0.58
ACLYP53396 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACLYP53396 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACLYP53396 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.65■□□□□ 0.58
ACLYP53396 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ACLYP53396 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ACLYP53396 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACLYP53396 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACLYP53396 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ACLYP53396 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.65■□□□□ 0.58
ACLYP53396 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ACLYP53396 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.65■□□□□ 0.58
ACLYP53396 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.65■□□□□ 0.58
ACLYP53396 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms