Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 AC092068.3-201ENST00000587894 2016 ntBASIC19.28■□□□□ 0.68
USP11P51784 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
USP11P51784 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
USP11P51784 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.28■□□□□ 0.68
USP11P51784 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
USP11P51784 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
USP11P51784 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.27■□□□□ 0.68
USP11P51784 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.27■□□□□ 0.68
USP11P51784 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
USP11P51784 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.27■□□□□ 0.68
USP11P51784 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
USP11P51784 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.27■□□□□ 0.68
USP11P51784 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.27■□□□□ 0.68
USP11P51784 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP11P51784 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.27■□□□□ 0.68
USP11P51784 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
USP11P51784 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
USP11P51784 AC060834.1-201ENST00000443027 2032 ntBASIC19.27■□□□□ 0.67
USP11P51784 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP11P51784 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.26■□□□□ 0.67
USP11P51784 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
USP11P51784 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.26■□□□□ 0.67
USP11P51784 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP11P51784 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP11P51784 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP11P51784 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP11P51784 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP11P51784 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP11P51784 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.26■□□□□ 0.67
USP11P51784 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.26■□□□□ 0.67
USP11P51784 PGAM5P1-201ENST00000518923 814 ntBASIC19.26■□□□□ 0.67
USP11P51784 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.26■□□□□ 0.67
USP11P51784 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.26■□□□□ 0.67
USP11P51784 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.26■□□□□ 0.67
USP11P51784 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP11P51784 AC005412.3-201ENST00000580309 715 ntBASIC19.26■□□□□ 0.67
USP11P51784 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.26■□□□□ 0.67
USP11P51784 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.26■□□□□ 0.67
USP11P51784 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
USP11P51784 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.26■□□□□ 0.67
USP11P51784 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP11P51784 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
USP11P51784 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP11P51784 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP11P51784 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.26■□□□□ 0.67
USP11P51784 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP11P51784 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP11P51784 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.25■□□□□ 0.67
USP11P51784 PMS2P7-201ENST00000506558 1336 ntBASIC19.25■□□□□ 0.67
USP11P51784 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
USP11P51784 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP11P51784 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP11P51784 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.25■□□□□ 0.67
USP11P51784 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.25■□□□□ 0.67
USP11P51784 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP11P51784 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.25■□□□□ 0.67
USP11P51784 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.25■□□□□ 0.67
USP11P51784 MIR940-201ENST00000401276 94 ntBASIC19.25■□□□□ 0.67
USP11P51784 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
USP11P51784 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.25■□□□□ 0.67
USP11P51784 POLD2P1-201ENST00000511220 997 ntBASIC19.25■□□□□ 0.67
USP11P51784 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
USP11P51784 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.25■□□□□ 0.67
USP11P51784 AC010507.1-201ENST00000633895 436 ntBASIC19.25■□□□□ 0.67
USP11P51784 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP11P51784 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.25■□□□□ 0.67
USP11P51784 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.25■□□□□ 0.67
USP11P51784 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP11P51784 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
USP11P51784 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP11P51784 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP11P51784 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
USP11P51784 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP11P51784 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.24■□□□□ 0.67
USP11P51784 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.24■□□□□ 0.67
USP11P51784 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP11P51784 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP11P51784 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP11P51784 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP11P51784 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.24■□□□□ 0.67
USP11P51784 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms