Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.24■□□□□ 0.03
SRP9P49458 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
SRP9P49458 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SRP9P49458 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
SRP9P49458 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.24■□□□□ 0.03
SRP9P49458 REXO1L11P-201ENST00000620964 1927 ntBASIC15.24■□□□□ 0.03
SRP9P49458 AL356309.3-201ENST00000624132 1934 ntBASIC15.24■□□□□ 0.03
SRP9P49458 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC15.24■□□□□ 0.03
SRP9P49458 MTCL1P1-201ENST00000446207 792 ntBASIC15.24■□□□□ 0.03
SRP9P49458 AC068472.1-201ENST00000474589 881 ntBASIC15.24■□□□□ 0.03
SRP9P49458 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.24■□□□□ 0.03
SRP9P49458 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SRP9P49458 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.24■□□□□ 0.03
SRP9P49458 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SRP9P49458 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.24■□□□□ 0.03
SRP9P49458 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
SRP9P49458 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.24■□□□□ 0.03
SRP9P49458 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SRP9P49458 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.24■□□□□ 0.03
SRP9P49458 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 PAUPAR-201ENST00000630360 2965 ntBASIC15.24■□□□□ 0.03
SRP9P49458 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.24■□□□□ 0.03
SRP9P49458 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.24■□□□□ 0.03
SRP9P49458 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP9P49458 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.24■□□□□ 0.03
SRP9P49458 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.23■□□□□ 0.03
SRP9P49458 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SRP9P49458 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SRP9P49458 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SRP9P49458 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
SRP9P49458 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.23■□□□□ 0.03
SRP9P49458 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.23■□□□□ 0.03
SRP9P49458 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
SRP9P49458 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.23■□□□□ 0.03
SRP9P49458 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.23■□□□□ 0.03
SRP9P49458 RN7SL606P-201ENST00000472779 293 ntBASIC15.23■□□□□ 0.03
SRP9P49458 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 AC112698.1-201ENST00000510299 916 ntBASIC15.23■□□□□ 0.03
SRP9P49458 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SRP9P49458 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.23■□□□□ 0.03
SRP9P49458 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.23■□□□□ 0.03
SRP9P49458 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.23■□□□□ 0.03
SRP9P49458 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SRP9P49458 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.23■□□□□ 0.03
SRP9P49458 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SRP9P49458 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SRP9P49458 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.23■□□□□ 0.03
SRP9P49458 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
SRP9P49458 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.22■□□□□ 0.03
SRP9P49458 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRP9P49458 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRP9P49458 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRP9P49458 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRP9P49458 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SRP9P49458 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.22■□□□□ 0.03
SRP9P49458 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
SRP9P49458 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRP9P49458 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRP9P49458 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.22■□□□□ 0.03
SRP9P49458 RNF216P1-203ENST00000404404 2427 ntBASIC15.22■□□□□ 0.03
SRP9P49458 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
SRP9P49458 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRP9P49458 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.22■□□□□ 0.03
SRP9P49458 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SRP9P49458 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.22■□□□□ 0.03
SRP9P49458 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SRP9P49458 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms