Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 GK-202ENST00000378941 458 ntTSL 3 BASIC17.86■□□□□ 0.45
MTHFRP42898 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
MTHFRP42898 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.86■□□□□ 0.45
MTHFRP42898 SPDYE7P-202ENST00000420373 878 ntBASIC17.86■□□□□ 0.45
MTHFRP42898 GPS2P2-201ENST00000430745 888 ntBASIC17.86■□□□□ 0.45
MTHFRP42898 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.86■□□□□ 0.45
MTHFRP42898 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.86■□□□□ 0.45
MTHFRP42898 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.86■□□□□ 0.45
MTHFRP42898 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.86■□□□□ 0.45
MTHFRP42898 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
MTHFRP42898 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.86■□□□□ 0.45
MTHFRP42898 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.86■□□□□ 0.45
MTHFRP42898 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.86■□□□□ 0.45
MTHFRP42898 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.86■□□□□ 0.45
MTHFRP42898 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.86■□□□□ 0.45
MTHFRP42898 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
MTHFRP42898 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
MTHFRP42898 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MTHFRP42898 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.85■□□□□ 0.45
MTHFRP42898 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
MTHFRP42898 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.85■□□□□ 0.45
MTHFRP42898 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MTHFRP42898 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MTHFRP42898 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MTHFRP42898 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MTHFRP42898 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
MTHFRP42898 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.85■□□□□ 0.45
MTHFRP42898 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
MTHFRP42898 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.85■□□□□ 0.45
MTHFRP42898 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.85■□□□□ 0.45
MTHFRP42898 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MTHFRP42898 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.85■□□□□ 0.45
MTHFRP42898 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
MTHFRP42898 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.85■□□□□ 0.45
MTHFRP42898 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.85■□□□□ 0.45
MTHFRP42898 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.85■□□□□ 0.45
MTHFRP42898 DUX4L17-201ENST00000557360 1267 ntBASIC17.85■□□□□ 0.45
MTHFRP42898 KRT8P23-201ENST00000560090 1207 ntBASIC17.85■□□□□ 0.45
MTHFRP42898 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.85■□□□□ 0.45
MTHFRP42898 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MTHFRP42898 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.85■□□□□ 0.45
MTHFRP42898 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
MTHFRP42898 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
MTHFRP42898 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
MTHFRP42898 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
MTHFRP42898 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.84■□□□□ 0.45
MTHFRP42898 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
MTHFRP42898 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.84■□□□□ 0.45
MTHFRP42898 SPCS2P4-201ENST00000436160 681 ntBASIC17.84■□□□□ 0.45
MTHFRP42898 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.84■□□□□ 0.45
MTHFRP42898 IGHV3-42-201ENST00000520410 361 ntBASIC17.84■□□□□ 0.45
MTHFRP42898 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
MTHFRP42898 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.84■□□□□ 0.45
MTHFRP42898 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.84■□□□□ 0.45
MTHFRP42898 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.84■□□□□ 0.45
MTHFRP42898 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
MTHFRP42898 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
MTHFRP42898 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MTHFRP42898 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
MTHFRP42898 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
MTHFRP42898 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
MTHFRP42898 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
MTHFRP42898 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
MTHFRP42898 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.83■□□□□ 0.45
MTHFRP42898 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MTHFRP42898 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.83■□□□□ 0.45
MTHFRP42898 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms