Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CLCN1P35523 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN1P35523 AC100803.2-201ENST00000562459 1963 ntBASIC19.5■□□□□ 0.71
CLCN1P35523 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
CLCN1P35523 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN1P35523 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CLCN1P35523 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN1P35523 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN1P35523 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCN1P35523 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN1P35523 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.5■□□□□ 0.71
CLCN1P35523 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.5■□□□□ 0.71
CLCN1P35523 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CLCN1P35523 LINC01451-201ENST00000623792 534 ntBASIC19.5■□□□□ 0.71
CLCN1P35523 AL023973.1-201ENST00000624619 620 ntBASIC19.5■□□□□ 0.71
CLCN1P35523 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN1P35523 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN1P35523 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN1P35523 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CLCN1P35523 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN1P35523 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN1P35523 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN1P35523 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.5■□□□□ 0.71
CLCN1P35523 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN1P35523 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN1P35523 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN1P35523 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN1P35523 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CLCN1P35523 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.5■□□□□ 0.71
CLCN1P35523 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCN1P35523 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLCN1P35523 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCN1P35523 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCN1P35523 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
CLCN1P35523 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.49■□□□□ 0.71
CLCN1P35523 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CLCN1P35523 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCN1P35523 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CLCN1P35523 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.49■□□□□ 0.71
CLCN1P35523 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCN1P35523 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLCN1P35523 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCN1P35523 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCN1P35523 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CLCN1P35523 AP000523.1-201ENST00000398242 1049 ntBASIC19.49■□□□□ 0.71
CLCN1P35523 AC211429.1-201ENST00000415277 523 ntBASIC19.49■□□□□ 0.71
CLCN1P35523 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.49■□□□□ 0.71
CLCN1P35523 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.49■□□□□ 0.71
CLCN1P35523 AC092865.7-201ENST00000641832 219 ntBASIC19.49■□□□□ 0.71
CLCN1P35523 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCN1P35523 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCN1P35523 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCN1P35523 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
CLCN1P35523 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCN1P35523 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.49■□□□□ 0.71
CLCN1P35523 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CLCN1P35523 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.49■□□□□ 0.71
CLCN1P35523 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CLCN1P35523 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCN1P35523 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCN1P35523 AC073347.1-201ENST00000421633 2643 ntBASIC19.48■□□□□ 0.71
CLCN1P35523 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLCN1P35523 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCN1P35523 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLCN1P35523 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC19.48■□□□□ 0.71
CLCN1P35523 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.48■□□□□ 0.71
CLCN1P35523 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CLCN1P35523 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CLCN1P35523 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCN1P35523 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CLCN1P35523 TERF1P1-201ENST00000311003 1181 ntBASIC19.48■□□□□ 0.71
CLCN1P35523 AC113347.1-201ENST00000413321 391 ntBASIC19.48■□□□□ 0.71
CLCN1P35523 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
CLCN1P35523 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.48■□□□□ 0.71
CLCN1P35523 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.48■□□□□ 0.71
CLCN1P35523 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCN1P35523 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.48■□□□□ 0.71
CLCN1P35523 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CLCN1P35523 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CLCN1P35523 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.48■□□□□ 0.71
CLCN1P35523 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CLCN1P35523 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.48■□□□□ 0.71
CLCN1P35523 BANP-203ENST00000393207 2438 ntTSL 2 BASIC19.47■□□□□ 0.71
CLCN1P35523 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC19.47■□□□□ 0.71
CLCN1P35523 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.47■□□□□ 0.71
CLCN1P35523 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CLCN1P35523 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CLCN1P35523 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
CLCN1P35523 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CLCN1P35523 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CLCN1P35523 LIN28AP1-201ENST00000429574 405 ntBASIC19.47■□□□□ 0.71
CLCN1P35523 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.47■□□□□ 0.71
CLCN1P35523 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.47■□□□□ 0.71
CLCN1P35523 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms