Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNGA1P29973 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.44■□□□□ 0.7
CNGA1P29973 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNGA1P29973 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNGA1P29973 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CNGA1P29973 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNGA1P29973 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNGA1P29973 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CNGA1P29973 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.44■□□□□ 0.7
CNGA1P29973 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNGA1P29973 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.44■□□□□ 0.7
CNGA1P29973 VPS29-207ENST00000549970 818 ntTSL 3 BASIC19.44■□□□□ 0.7
CNGA1P29973 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNGA1P29973 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.44■□□□□ 0.7
CNGA1P29973 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNGA1P29973 AJ011932.1-201ENST00000621707 465 ntBASIC19.44■□□□□ 0.7
CNGA1P29973 AC009093.7-201ENST00000623853 1223 ntBASIC19.44■□□□□ 0.7
CNGA1P29973 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNGA1P29973 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CNGA1P29973 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CNGA1P29973 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CNGA1P29973 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.44■□□□□ 0.7
CNGA1P29973 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNGA1P29973 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.44■□□□□ 0.7
CNGA1P29973 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNGA1P29973 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNGA1P29973 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNGA1P29973 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CNGA1P29973 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CNGA1P29973 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.43■□□□□ 0.7
CNGA1P29973 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CNGA1P29973 AC134043.2-201ENST00000624206 2238 ntBASIC19.43■□□□□ 0.7
CNGA1P29973 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.43■□□□□ 0.7
CNGA1P29973 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.43■□□□□ 0.7
CNGA1P29973 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CNGA1P29973 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.43■□□□□ 0.7
CNGA1P29973 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.43■□□□□ 0.7
CNGA1P29973 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.43■□□□□ 0.7
CNGA1P29973 KRT8P48-201ENST00000515599 1220 ntBASIC19.43■□□□□ 0.7
CNGA1P29973 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.43■□□□□ 0.7
CNGA1P29973 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CNGA1P29973 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.43■□□□□ 0.7
CNGA1P29973 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.43■□□□□ 0.7
CNGA1P29973 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.43■□□□□ 0.7
CNGA1P29973 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.43■□□□□ 0.7
CNGA1P29973 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CNGA1P29973 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.43■□□□□ 0.7
CNGA1P29973 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CNGA1P29973 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.43■□□□□ 0.7
CNGA1P29973 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.43■□□□□ 0.7
CNGA1P29973 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNGA1P29973 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.42■□□□□ 0.7
CNGA1P29973 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CNGA1P29973 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNGA1P29973 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNGA1P29973 AL355306.1-201ENST00000415580 579 ntBASIC19.42■□□□□ 0.7
CNGA1P29973 ADH5P3-201ENST00000433842 1137 ntBASIC19.42■□□□□ 0.7
CNGA1P29973 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.42■□□□□ 0.7
CNGA1P29973 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.42■□□□□ 0.7
CNGA1P29973 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.42■□□□□ 0.7
CNGA1P29973 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNGA1P29973 AL592309.1-201ENST00000443127 649 ntBASIC19.42■□□□□ 0.7
CNGA1P29973 FAM86C2P-203ENST00000528684 1004 ntBASIC19.42■□□□□ 0.7
CNGA1P29973 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.42■□□□□ 0.7
CNGA1P29973 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.42■□□□□ 0.7
CNGA1P29973 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.42■□□□□ 0.7
CNGA1P29973 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.42■□□□□ 0.7
CNGA1P29973 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNGA1P29973 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.42■□□□□ 0.7
CNGA1P29973 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.42■□□□□ 0.7
CNGA1P29973 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNGA1P29973 AC067852.2-201ENST00000590513 2313 ntBASIC19.42■□□□□ 0.7
CNGA1P29973 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
CNGA1P29973 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.42■□□□□ 0.7
CNGA1P29973 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CNGA1P29973 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNGA1P29973 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNGA1P29973 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.42■□□□□ 0.7
CNGA1P29973 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNGA1P29973 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNGA1P29973 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms