Protein–RNA interactions for Protein: P18564

ITGB6, Integrin beta-6, humanhuman

Predictions only

Length 788 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6P18564 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
ITGB6P18564 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGB6P18564 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.1■□□□□ 0.33
ITGB6P18564 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.1■□□□□ 0.33
ITGB6P18564 SLC25A1P3-201ENST00000395415 828 ntBASIC17.1■□□□□ 0.33
ITGB6P18564 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.1■□□□□ 0.33
ITGB6P18564 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.1■□□□□ 0.33
ITGB6P18564 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGB6P18564 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGB6P18564 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.1■□□□□ 0.33
ITGB6P18564 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.1■□□□□ 0.33
ITGB6P18564 NKAPP1-205ENST00000585790 367 ntBASIC17.1■□□□□ 0.33
ITGB6P18564 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.1■□□□□ 0.33
ITGB6P18564 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
ITGB6P18564 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGB6P18564 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGB6P18564 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGB6P18564 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGB6P18564 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGB6P18564 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
ITGB6P18564 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.1■□□□□ 0.33
ITGB6P18564 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGB6P18564 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGB6P18564 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ITGB6P18564 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ITGB6P18564 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
ITGB6P18564 AC097637.2-201ENST00000624096 1997 ntBASIC17.09■□□□□ 0.33
ITGB6P18564 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ITGB6P18564 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
ITGB6P18564 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGB6P18564 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
ITGB6P18564 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
ITGB6P18564 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.09■□□□□ 0.33
ITGB6P18564 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGB6P18564 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGB6P18564 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGB6P18564 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGB6P18564 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.09■□□□□ 0.33
ITGB6P18564 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
ITGB6P18564 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.09■□□□□ 0.33
ITGB6P18564 BX842568.4-201ENST00000421222 227 ntBASIC17.09■□□□□ 0.33
ITGB6P18564 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.09■□□□□ 0.33
ITGB6P18564 KRT18P67-201ENST00000432816 1264 ntBASIC17.09■□□□□ 0.33
ITGB6P18564 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.09■□□□□ 0.33
ITGB6P18564 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.09■□□□□ 0.33
ITGB6P18564 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.09■□□□□ 0.33
ITGB6P18564 LINC02084-201ENST00000606069 1096 ntBASIC17.09■□□□□ 0.33
ITGB6P18564 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.09■□□□□ 0.33
ITGB6P18564 AC148477.8-201ENST00000624298 468 ntBASIC17.09■□□□□ 0.33
ITGB6P18564 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
ITGB6P18564 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGB6P18564 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.09■□□□□ 0.33
ITGB6P18564 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGB6P18564 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGB6P18564 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
ITGB6P18564 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGB6P18564 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ITGB6P18564 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITGB6P18564 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITGB6P18564 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITGB6P18564 AC022211.2-201ENST00000585075 2527 ntBASIC17.08■□□□□ 0.33
ITGB6P18564 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITGB6P18564 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
ITGB6P18564 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
ITGB6P18564 AL356309.3-201ENST00000624132 1934 ntBASIC17.08■□□□□ 0.33
ITGB6P18564 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITGB6P18564 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.08■□□□□ 0.32
ITGB6P18564 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITGB6P18564 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITGB6P18564 AC243591.1-201ENST00000452967 1364 ntBASIC17.08■□□□□ 0.32
ITGB6P18564 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.08■□□□□ 0.32
ITGB6P18564 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITGB6P18564 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.08■□□□□ 0.32
ITGB6P18564 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
ITGB6P18564 FGFR3P6-201ENST00000457012 610 ntBASIC17.08■□□□□ 0.32
ITGB6P18564 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.08■□□□□ 0.32
ITGB6P18564 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITGB6P18564 SART3-203ENST00000546611 1184 ntBASIC17.08■□□□□ 0.32
ITGB6P18564 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.08■□□□□ 0.32
ITGB6P18564 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.08■□□□□ 0.32
ITGB6P18564 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.08■□□□□ 0.32
ITGB6P18564 TERC-201ENST00000602385 541 ntBASIC17.08■□□□□ 0.32
ITGB6P18564 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.08■□□□□ 0.32
ITGB6P18564 AL355877.3-201ENST00000622820 899 ntBASIC17.08■□□□□ 0.32
ITGB6P18564 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
ITGB6P18564 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.08■□□□□ 0.32
ITGB6P18564 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITGB6P18564 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITGB6P18564 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ITGB6P18564 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
ITGB6P18564 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
ITGB6P18564 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ITGB6P18564 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ITGB6P18564 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ITGB6P18564 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ITGB6P18564 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.07■□□□□ 0.32
ITGB6P18564 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ITGB6P18564 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ITGB6P18564 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ITGB6P18564 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms