Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.07■□□□□ 0.48
PTPN1P18031 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN1P18031 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.07■□□□□ 0.48
PTPN1P18031 AC107918.2-201ENST00000530817 355 ntBASIC18.07■□□□□ 0.48
PTPN1P18031 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.07■□□□□ 0.48
PTPN1P18031 ACTL9-202ENST00000612068 1252 ntBASIC18.07■□□□□ 0.48
PTPN1P18031 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.07■□□□□ 0.48
PTPN1P18031 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.07■□□□□ 0.48
PTPN1P18031 AC092865.6-201ENST00000642101 219 ntBASIC18.07■□□□□ 0.48
PTPN1P18031 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
PTPN1P18031 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN1P18031 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN1P18031 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PTPN1P18031 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN1P18031 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PTPN1P18031 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.07■□□□□ 0.48
PTPN1P18031 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN1P18031 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PTPN1P18031 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
PTPN1P18031 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN1P18031 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN1P18031 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PTPN1P18031 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN1P18031 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
PTPN1P18031 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PTPN1P18031 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
PTPN1P18031 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
PTPN1P18031 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN1P18031 AC023511.2-201ENST00000618803 211 ntBASIC18.06■□□□□ 0.48
PTPN1P18031 AC004877.2-201ENST00000623941 599 ntBASIC18.06■□□□□ 0.48
PTPN1P18031 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN1P18031 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN1P18031 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN1P18031 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.06■□□□□ 0.48
PTPN1P18031 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.06■□□□□ 0.48
PTPN1P18031 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PTPN1P18031 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN1P18031 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PTPN1P18031 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN1P18031 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN1P18031 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
PTPN1P18031 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN1P18031 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN1P18031 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN1P18031 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN1P18031 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPN1P18031 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPN1P18031 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN1P18031 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN1P18031 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN1P18031 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.05■□□□□ 0.48
PTPN1P18031 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN1P18031 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN1P18031 DUX4L17-201ENST00000557360 1267 ntBASIC18.05■□□□□ 0.48
PTPN1P18031 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPN1P18031 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PTPN1P18031 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPN1P18031 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.05■□□□□ 0.48
PTPN1P18031 AL513190.1-201ENST00000621254 727 ntBASIC18.05■□□□□ 0.48
PTPN1P18031 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
PTPN1P18031 AC108860.2-201ENST00000562760 2183 ntBASIC18.05■□□□□ 0.48
PTPN1P18031 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PTPN1P18031 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN1P18031 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN1P18031 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN1P18031 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN1P18031 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN1P18031 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PTPN1P18031 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN1P18031 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
PTPN1P18031 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PTPN1P18031 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PTPN1P18031 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.05■□□□□ 0.48
PTPN1P18031 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.05■□□□□ 0.48
PTPN1P18031 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.04■□□□□ 0.48
PTPN1P18031 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PTPN1P18031 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms