Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 AC097637.2-201ENST00000624096 1997 ntBASIC18.91■□□□□ 0.62
ATP2A2P16615 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
ATP2A2P16615 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ATP2A2P16615 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
ATP2A2P16615 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A2P16615 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A2P16615 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A2P16615 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A2P16615 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ATP2A2P16615 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.9■□□□□ 0.62
ATP2A2P16615 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
ATP2A2P16615 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
ATP2A2P16615 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ATP2A2P16615 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
ATP2A2P16615 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 AC135776.1-201ENST00000319817 2481 ntBASIC18.9■□□□□ 0.62
ATP2A2P16615 AC008764.6-201ENST00000595909 2069 ntBASIC18.9■□□□□ 0.62
ATP2A2P16615 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.9■□□□□ 0.62
ATP2A2P16615 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC18.9■□□□□ 0.62
ATP2A2P16615 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.9■□□□□ 0.62
ATP2A2P16615 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.9■□□□□ 0.62
ATP2A2P16615 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.9■□□□□ 0.62
ATP2A2P16615 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
ATP2A2P16615 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
ATP2A2P16615 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ATP2A2P16615 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
ATP2A2P16615 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.9■□□□□ 0.62
ATP2A2P16615 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ATP2A2P16615 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
ATP2A2P16615 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
ATP2A2P16615 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A2P16615 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A2P16615 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A2P16615 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A2P16615 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A2P16615 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A2P16615 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A2P16615 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A2P16615 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A2P16615 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A2P16615 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A2P16615 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A2P16615 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A2P16615 CXCL1P1-201ENST00000502804 216 ntBASIC18.89■□□□□ 0.61
ATP2A2P16615 STK19B-204ENST00000512515 211 ntBASIC18.89■□□□□ 0.61
ATP2A2P16615 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
ATP2A2P16615 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A2P16615 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A2P16615 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.89■□□□□ 0.61
ATP2A2P16615 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ATP2A2P16615 AJ011932.1-201ENST00000621707 465 ntBASIC18.89■□□□□ 0.61
ATP2A2P16615 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
ATP2A2P16615 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A2P16615 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A2P16615 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A2P16615 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.89■□□□□ 0.61
ATP2A2P16615 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A2P16615 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A2P16615 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ATP2A2P16615 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.89■□□□□ 0.61
ATP2A2P16615 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
ATP2A2P16615 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A2P16615 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A2P16615 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A2P16615 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
ATP2A2P16615 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.88■□□□□ 0.61
ATP2A2P16615 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A2P16615 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A2P16615 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A2P16615 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A2P16615 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A2P16615 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A2P16615 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP2A2P16615 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A2P16615 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A2P16615 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP2A2P16615 AC005034.1-201ENST00000426657 489 ntBASIC18.88■□□□□ 0.61
ATP2A2P16615 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
ATP2A2P16615 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ATP2A2P16615 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.88■□□□□ 0.61
ATP2A2P16615 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.88■□□□□ 0.61
ATP2A2P16615 AC093520.2-201ENST00000561830 333 ntBASIC18.88■□□□□ 0.61
ATP2A2P16615 AC109462.3-201ENST00000573934 613 ntBASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms