Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
H2AFXP16104 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
H2AFXP16104 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
H2AFXP16104 AL353807.1-201ENST00000427475 662 ntBASIC17.77■□□□□ 0.44
H2AFXP16104 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.77■□□□□ 0.44
H2AFXP16104 SEC1P-202ENST00000473944 940 ntBASIC17.77■□□□□ 0.44
H2AFXP16104 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.77■□□□□ 0.44
H2AFXP16104 SLC25A1P4-201ENST00000567977 778 ntBASIC17.77■□□□□ 0.44
H2AFXP16104 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
H2AFXP16104 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
H2AFXP16104 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
H2AFXP16104 GGT4P-201ENST00000623672 1708 ntBASIC17.77■□□□□ 0.44
H2AFXP16104 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
H2AFXP16104 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
H2AFXP16104 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
H2AFXP16104 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
H2AFXP16104 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
H2AFXP16104 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.77■□□□□ 0.43
H2AFXP16104 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
H2AFXP16104 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
H2AFXP16104 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.77■□□□□ 0.43
H2AFXP16104 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
H2AFXP16104 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.77■□□□□ 0.43
H2AFXP16104 AC112504.1-201ENST00000623415 1841 ntBASIC17.77■□□□□ 0.43
H2AFXP16104 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.77■□□□□ 0.43
H2AFXP16104 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.77■□□□□ 0.43
H2AFXP16104 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
H2AFXP16104 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
H2AFXP16104 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
H2AFXP16104 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2AFXP16104 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.76■□□□□ 0.43
H2AFXP16104 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H2AFXP16104 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.76■□□□□ 0.43
H2AFXP16104 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.76■□□□□ 0.43
H2AFXP16104 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.76■□□□□ 0.43
H2AFXP16104 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2AFXP16104 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
H2AFXP16104 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
H2AFXP16104 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2AFXP16104 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.76■□□□□ 0.43
H2AFXP16104 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
H2AFXP16104 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2AFXP16104 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H2AFXP16104 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2AFXP16104 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
H2AFXP16104 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2AFXP16104 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.76■□□□□ 0.43
H2AFXP16104 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2AFXP16104 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2AFXP16104 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2AFXP16104 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
H2AFXP16104 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2AFXP16104 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2AFXP16104 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
H2AFXP16104 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
H2AFXP16104 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.75■□□□□ 0.43
H2AFXP16104 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
H2AFXP16104 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.75■□□□□ 0.43
H2AFXP16104 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.75■□□□□ 0.43
H2AFXP16104 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
H2AFXP16104 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 AL359258.3-201ENST00000622910 2331 ntBASIC17.75■□□□□ 0.43
H2AFXP16104 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 KRT17P3-201ENST00000420566 1262 ntBASIC17.75■□□□□ 0.43
H2AFXP16104 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.75■□□□□ 0.43
H2AFXP16104 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.75■□□□□ 0.43
H2AFXP16104 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.75■□□□□ 0.43
H2AFXP16104 DGCR10-201ENST00000609839 495 ntBASIC17.75■□□□□ 0.43
H2AFXP16104 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
H2AFXP16104 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.75■□□□□ 0.43
H2AFXP16104 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
H2AFXP16104 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
H2AFXP16104 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.75■□□□□ 0.43
H2AFXP16104 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2AFXP16104 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
H2AFXP16104 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC17.74■□□□□ 0.43
H2AFXP16104 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
H2AFXP16104 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms