Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.72■□□□□ 0.27
PCNAP12004 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.72■□□□□ 0.27
PCNAP12004 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.72■□□□□ 0.27
PCNAP12004 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 AC093525.9-201ENST00000624961 1746 ntBASIC16.72■□□□□ 0.27
PCNAP12004 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PCNAP12004 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 PCDHB19P-201ENST00000570871 2371 ntBASIC16.72■□□□□ 0.27
PCNAP12004 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.72■□□□□ 0.27
PCNAP12004 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.72■□□□□ 0.27
PCNAP12004 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PCNAP12004 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCNAP12004 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCNAP12004 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
PCNAP12004 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.71■□□□□ 0.27
PCNAP12004 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.71■□□□□ 0.27
PCNAP12004 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.71■□□□□ 0.27
PCNAP12004 FOSL1P1-201ENST00000511041 816 ntBASIC16.71■□□□□ 0.27
PCNAP12004 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
PCNAP12004 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.71■□□□□ 0.27
PCNAP12004 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.71■□□□□ 0.27
PCNAP12004 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.71■□□□□ 0.27
PCNAP12004 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCNAP12004 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PCNAP12004 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
PCNAP12004 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
PCNAP12004 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PCNAP12004 PCDHA14-201ENST00000506751 2298 ntBASIC16.71■□□□□ 0.27
PCNAP12004 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCNAP12004 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCNAP12004 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCNAP12004 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
PCNAP12004 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.71■□□□□ 0.26
PCNAP12004 AC079328.2-201ENST00000561241 3354 ntBASIC16.71■□□□□ 0.26
PCNAP12004 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
PCNAP12004 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.7■□□□□ 0.26
PCNAP12004 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCNAP12004 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCNAP12004 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.7■□□□□ 0.26
PCNAP12004 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCNAP12004 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCNAP12004 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCNAP12004 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCNAP12004 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.7■□□□□ 0.26
PCNAP12004 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCNAP12004 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
PCNAP12004 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.7■□□□□ 0.26
PCNAP12004 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCNAP12004 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCNAP12004 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCNAP12004 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
PCNAP12004 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
PCNAP12004 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
PCNAP12004 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.7■□□□□ 0.26
PCNAP12004 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.7■□□□□ 0.26
PCNAP12004 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.7■□□□□ 0.26
PCNAP12004 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
PCNAP12004 MIR5100-201ENST00000579544 119 ntBASIC16.7■□□□□ 0.26
PCNAP12004 AL591684.3-201ENST00000605187 298 ntBASIC16.7■□□□□ 0.26
PCNAP12004 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.7■□□□□ 0.26
PCNAP12004 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
PCNAP12004 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCNAP12004 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
PCNAP12004 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCNAP12004 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC16.7■□□□□ 0.26
PCNAP12004 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.7■□□□□ 0.26
PCNAP12004 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCNAP12004 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
PCNAP12004 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
PCNAP12004 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.7■□□□□ 0.26
PCNAP12004 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.7■□□□□ 0.26
PCNAP12004 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
PCNAP12004 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
PCNAP12004 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms