Protein–RNA interactions for Protein: P11230

CHRNB1, Acetylcholine receptor subunit beta, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1P11230 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.29■□□□□ 0.36
CHRNB1P11230 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNB1P11230 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNB1P11230 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNB1P11230 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CHRNB1P11230 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNB1P11230 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHRNB1P11230 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNB1P11230 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNB1P11230 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHRNB1P11230 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.29■□□□□ 0.36
CHRNB1P11230 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNB1P11230 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNB1P11230 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CHRNB1P11230 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNB1P11230 AC018470.1-201ENST00000624790 3129 ntBASIC17.28■□□□□ 0.36
CHRNB1P11230 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNB1P11230 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNB1P11230 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.28■□□□□ 0.36
CHRNB1P11230 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.28■□□□□ 0.36
CHRNB1P11230 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNB1P11230 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNB1P11230 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
CHRNB1P11230 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CHRNB1P11230 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNB1P11230 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNB1P11230 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNB1P11230 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRNB1P11230 TREML5P-201ENST00000421694 576 ntBASIC17.28■□□□□ 0.36
CHRNB1P11230 SPDYE14P-201ENST00000442619 822 ntBASIC17.28■□□□□ 0.36
CHRNB1P11230 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.28■□□□□ 0.36
CHRNB1P11230 IGHV3-62-201ENST00000520057 340 ntBASIC17.28■□□□□ 0.36
CHRNB1P11230 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CHRNB1P11230 KRT8P23-201ENST00000560090 1207 ntBASIC17.28■□□□□ 0.36
CHRNB1P11230 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC17.28■□□□□ 0.36
CHRNB1P11230 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.28■□□□□ 0.36
CHRNB1P11230 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNB1P11230 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CHRNB1P11230 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.28■□□□□ 0.36
CHRNB1P11230 AC084121.4-201ENST00000641598 221 ntBASIC17.28■□□□□ 0.36
CHRNB1P11230 AF228730.8-201ENST00000642140 221 ntBASIC17.28■□□□□ 0.36
CHRNB1P11230 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNB1P11230 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNB1P11230 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
CHRNB1P11230 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNB1P11230 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNB1P11230 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNB1P11230 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.28■□□□□ 0.36
CHRNB1P11230 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRNB1P11230 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHRNB1P11230 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNB1P11230 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CHRNB1P11230 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.27■□□□□ 0.36
CHRNB1P11230 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNB1P11230 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRNB1P11230 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNB1P11230 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CHRNB1P11230 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNB1P11230 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNB1P11230 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNB1P11230 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CHRNB1P11230 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CHRNB1P11230 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRNB1P11230 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNB1P11230 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRNB1P11230 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNB1P11230 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNB1P11230 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNB1P11230 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNB1P11230 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNB1P11230 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNB1P11230 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.27■□□□□ 0.36
CHRNB1P11230 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.27■□□□□ 0.36
CHRNB1P11230 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRNB1P11230 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC17.27■□□□□ 0.36
CHRNB1P11230 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.27■□□□□ 0.36
CHRNB1P11230 FAM207CP-201ENST00000443486 507 ntBASIC17.27■□□□□ 0.36
CHRNB1P11230 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRNB1P11230 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CHRNB1P11230 SLC25A39P2-201ENST00000537614 270 ntBASIC17.27■□□□□ 0.36
CHRNB1P11230 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CHRNB1P11230 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.27■□□□□ 0.36
CHRNB1P11230 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.27■□□□□ 0.36
CHRNB1P11230 LINC02560-201ENST00000596379 459 ntBASIC17.27■□□□□ 0.36
CHRNB1P11230 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.27■□□□□ 0.36
CHRNB1P11230 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CHRNB1P11230 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.27■□□□□ 0.36
CHRNB1P11230 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.27■□□□□ 0.36
CHRNB1P11230 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CHRNB1P11230 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHRNB1P11230 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRNB1P11230 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRNB1P11230 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CHRNB1P11230 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHRNB1P11230 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRNB1P11230 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRNB1P11230 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.27■□□□□ 0.35
CHRNB1P11230 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CHRNB1P11230 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRNB1P11230 UXT-AS1-201ENST00000590504 1525 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms