Protein–RNA interactions for Protein: P0C0S8

HIST1H2AG, Histone H2A type 1, humanhuman

Predicted RBP Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AGP0C0S8 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 BX005266.1-201ENST00000473402 457 ntBASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 CLEC4GP1-201ENST00000596555 870 ntBASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 AL355877.3-201ENST00000622820 899 ntBASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 AC004817.3-201ENST00000602957 2129 ntBASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST1H2AGP0C0S8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 LINC00982-205ENST00000420957 435 ntBASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 NKAPP1-205ENST00000585790 367 ntBASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 AC008608.2-201ENST00000606089 416 ntBASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 AC092053.1-201ENST00000605787 1936 ntBASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST1H2AGP0C0S8 AC022211.2-201ENST00000585075 2527 ntBASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 NCF1C-201ENST00000438382 1427 ntBASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 REXO1L6P-202ENST00000619970 1078 ntBASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST1H2AGP0C0S8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms