Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CSF1P09603 AL356309.3-201ENST00000624132 1934 ntBASIC14.86□□□□□ -0.03
CSF1P09603 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CSF1P09603 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CSF1P09603 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CSF1P09603 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.85□□□□□ -0.03
CSF1P09603 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CSF1P09603 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC14.85□□□□□ -0.03
CSF1P09603 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CSF1P09603 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.85□□□□□ -0.03
CSF1P09603 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.85□□□□□ -0.03
CSF1P09603 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
CSF1P09603 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.85□□□□□ -0.03
CSF1P09603 KRT18P65-201ENST00000439811 1286 ntBASIC14.85□□□□□ -0.03
CSF1P09603 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.85□□□□□ -0.03
CSF1P09603 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.85□□□□□ -0.03
CSF1P09603 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.85□□□□□ -0.03
CSF1P09603 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.85□□□□□ -0.03
CSF1P09603 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.85□□□□□ -0.03
CSF1P09603 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CSF1P09603 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CSF1P09603 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CSF1P09603 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CSF1P09603 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.84□□□□□ -0.03
CSF1P09603 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.84□□□□□ -0.03
CSF1P09603 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.84□□□□□ -0.03
CSF1P09603 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.84□□□□□ -0.03
CSF1P09603 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.84□□□□□ -0.03
CSF1P09603 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 AC092171.3-201ENST00000610122 2651 ntBASIC14.84□□□□□ -0.03
CSF1P09603 AC068587.6-202ENST00000641839 5619 ntBASIC14.84□□□□□ -0.03
CSF1P09603 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.84□□□□□ -0.03
CSF1P09603 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.84□□□□□ -0.03
CSF1P09603 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 AL450487.1-201ENST00000426799 995 ntBASIC14.84□□□□□ -0.03
CSF1P09603 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC14.84□□□□□ -0.03
CSF1P09603 VENTXP5-201ENST00000523979 775 ntBASIC14.84□□□□□ -0.03
CSF1P09603 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.84□□□□□ -0.03
CSF1P09603 AP003041.3-201ENST00000527151 707 ntBASIC14.84□□□□□ -0.03
CSF1P09603 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.84□□□□□ -0.03
CSF1P09603 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.84□□□□□ -0.03
CSF1P09603 AL441883.1-201ENST00000566170 1045 ntBASIC14.84□□□□□ -0.03
CSF1P09603 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CSF1P09603 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.84□□□□□ -0.03
CSF1P09603 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
CSF1P09603 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CSF1P09603 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.84□□□□□ -0.03
CSF1P09603 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.84□□□□□ -0.03
CSF1P09603 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CSF1P09603 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.84□□□□□ -0.03
CSF1P09603 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms