Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ERCC1P07992 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.22■□□□□ 0.03
ERCC1P07992 TP73-AS1-210ENST00000637775 1455 ntBASIC15.22■□□□□ 0.03
ERCC1P07992 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
ERCC1P07992 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.22■□□□□ 0.03
ERCC1P07992 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.22■□□□□ 0.03
ERCC1P07992 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 AC112698.1-201ENST00000510299 916 ntBASIC15.22■□□□□ 0.03
ERCC1P07992 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.22■□□□□ 0.03
ERCC1P07992 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC15.22■□□□□ 0.03
ERCC1P07992 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.22■□□□□ 0.03
ERCC1P07992 BNIP3P18-201ENST00000593976 575 ntBASIC15.22■□□□□ 0.03
ERCC1P07992 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.22■□□□□ 0.03
ERCC1P07992 REXO1L6P-202ENST00000619970 1078 ntBASIC15.22■□□□□ 0.03
ERCC1P07992 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.22■□□□□ 0.03
ERCC1P07992 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.22■□□□□ 0.03
ERCC1P07992 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ERCC1P07992 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.22■□□□□ 0.03
ERCC1P07992 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 LYSMD4-203ENST00000378904 2122 ntBASIC15.22■□□□□ 0.03
ERCC1P07992 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC1P07992 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
ERCC1P07992 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC1P07992 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC1P07992 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC1P07992 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC1P07992 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
ERCC1P07992 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC1P07992 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC1P07992 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.21■□□□□ 0.03
ERCC1P07992 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
ERCC1P07992 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ERCC1P07992 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
ERCC1P07992 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC1P07992 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC15.21■□□□□ 0.03
ERCC1P07992 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ERCC1P07992 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
ERCC1P07992 SCARNA2-201ENST00000458748 420 ntBASIC15.21■□□□□ 0.03
ERCC1P07992 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.21■□□□□ 0.03
ERCC1P07992 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.21■□□□□ 0.03
ERCC1P07992 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.21■□□□□ 0.03
ERCC1P07992 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.21■□□□□ 0.03
ERCC1P07992 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.21■□□□□ 0.03
ERCC1P07992 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC15.21■□□□□ 0.03
ERCC1P07992 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.21■□□□□ 0.03
ERCC1P07992 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC1P07992 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.21■□□□□ 0.03
ERCC1P07992 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ERCC1P07992 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.21■□□□□ 0.03
ERCC1P07992 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC1P07992 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC1P07992 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ERCC1P07992 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC1P07992 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.21■□□□□ 0.02
ERCC1P07992 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ERCC1P07992 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ERCC1P07992 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
ERCC1P07992 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
ERCC1P07992 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
ERCC1P07992 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
ERCC1P07992 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
ERCC1P07992 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC1P07992 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
ERCC1P07992 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC1P07992 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.2■□□□□ 0.02
ERCC1P07992 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC1P07992 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC1P07992 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC1P07992 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.2■□□□□ 0.02
ERCC1P07992 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC1P07992 AC091607.1-201ENST00000490318 1060 ntBASIC15.2■□□□□ 0.02
ERCC1P07992 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC1P07992 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.2■□□□□ 0.02
ERCC1P07992 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC1P07992 AL031008.1-201ENST00000619963 541 ntBASIC15.2■□□□□ 0.02
ERCC1P07992 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC1P07992 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
ERCC1P07992 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC1P07992 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC1P07992 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC1P07992 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.2■□□□□ 0.02
ERCC1P07992 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ERCC1P07992 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.2■□□□□ 0.02
ERCC1P07992 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ERCC1P07992 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms