Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL5A2P05997 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL5A2P05997 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL5A2P05997 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL5A2P05997 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC22.19■■□□□ 1.14
COL5A2P05997 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL5A2P05997 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL5A2P05997 SPDYE18-201ENST00000510091 1050 ntBASIC22.19■■□□□ 1.14
COL5A2P05997 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC22.19■■□□□ 1.14
COL5A2P05997 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
COL5A2P05997 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
COL5A2P05997 AL589739.1-201ENST00000607720 493 ntBASIC22.19■■□□□ 1.14
COL5A2P05997 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.19■■□□□ 1.14
COL5A2P05997 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
COL5A2P05997 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
COL5A2P05997 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL5A2P05997 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL5A2P05997 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC22.19■■□□□ 1.14
COL5A2P05997 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL5A2P05997 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL5A2P05997 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL5A2P05997 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL5A2P05997 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL5A2P05997 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL5A2P05997 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC22.18■■□□□ 1.14
COL5A2P05997 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL5A2P05997 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
COL5A2P05997 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL5A2P05997 AL512384.1-201ENST00000406683 331 ntBASIC22.18■■□□□ 1.14
COL5A2P05997 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC22.18■■□□□ 1.14
COL5A2P05997 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC22.18■■□□□ 1.14
COL5A2P05997 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC22.18■■□□□ 1.14
COL5A2P05997 AC135586.1-201ENST00000539323 574 ntBASIC22.18■■□□□ 1.14
COL5A2P05997 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
COL5A2P05997 AC132938.2-201ENST00000579188 680 ntBASIC22.18■■□□□ 1.14
COL5A2P05997 AC017083.2-201ENST00000608069 979 ntBASIC22.18■■□□□ 1.14
COL5A2P05997 AL591163.1-201ENST00000641757 987 ntBASIC22.18■■□□□ 1.14
COL5A2P05997 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL5A2P05997 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL5A2P05997 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22.18■■□□□ 1.14
COL5A2P05997 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL5A2P05997 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
COL5A2P05997 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL5A2P05997 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
COL5A2P05997 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
COL5A2P05997 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
COL5A2P05997 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL5A2P05997 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL5A2P05997 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL5A2P05997 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.17■■□□□ 1.14
COL5A2P05997 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL5A2P05997 AC073439.1-201ENST00000624121 1774 ntBASIC22.17■■□□□ 1.14
COL5A2P05997 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL5A2P05997 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL5A2P05997 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL5A2P05997 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL5A2P05997 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC22.17■■□□□ 1.14
COL5A2P05997 AP006294.1-201ENST00000415407 339 ntBASIC22.17■■□□□ 1.14
COL5A2P05997 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC22.17■■□□□ 1.14
COL5A2P05997 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC22.17■■□□□ 1.14
COL5A2P05997 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
COL5A2P05997 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL5A2P05997 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC22.17■■□□□ 1.14
COL5A2P05997 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC22.17■■□□□ 1.14
COL5A2P05997 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC22.17■■□□□ 1.14
COL5A2P05997 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL5A2P05997 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
COL5A2P05997 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL5A2P05997 ABALON-201ENST00000629058 1903 ntBASIC22.17■■□□□ 1.14
COL5A2P05997 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL5A2P05997 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
COL5A2P05997 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
COL5A2P05997 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL5A2P05997 FRMD8P1-201ENST00000440433 1524 ntBASIC22.17■■□□□ 1.14
COL5A2P05997 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL5A2P05997 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC22.16■■□□□ 1.14
COL5A2P05997 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC22.16■■□□□ 1.14
COL5A2P05997 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL5A2P05997 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC22.16■■□□□ 1.14
COL5A2P05997 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC22.16■■□□□ 1.14
COL5A2P05997 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL5A2P05997 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC22.16■■□□□ 1.14
COL5A2P05997 GNAQP1-201ENST00000444815 1067 ntBASIC22.16■■□□□ 1.14
COL5A2P05997 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC22.16■■□□□ 1.14
COL5A2P05997 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL5A2P05997 AL512361.1-201ENST00000554200 418 ntBASIC22.16■■□□□ 1.14
COL5A2P05997 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC22.16■■□□□ 1.14
COL5A2P05997 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL5A2P05997 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
COL5A2P05997 BTBD7P1-201ENST00000447253 1453 ntBASIC22.16■■□□□ 1.14
COL5A2P05997 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL5A2P05997 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
COL5A2P05997 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
COL5A2P05997 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL5A2P05997 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL5A2P05997 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
COL5A2P05997 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL5A2P05997 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL5A2P05997 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
COL5A2P05997 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms