Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HLA-DQB2P05538 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQB2P05538 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.34■□□□□ 0.37
HLA-DQB2P05538 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HLA-DQB2P05538 NKILA-202ENST00000614771 2598 ntBASIC17.34■□□□□ 0.37
HLA-DQB2P05538 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQB2P05538 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
HLA-DQB2P05538 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQB2P05538 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQB2P05538 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQB2P05538 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQB2P05538 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQB2P05538 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQB2P05538 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQB2P05538 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.33■□□□□ 0.37
HLA-DQB2P05538 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.33■□□□□ 0.37
HLA-DQB2P05538 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HLA-DQB2P05538 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.33■□□□□ 0.37
HLA-DQB2P05538 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 MIR1199-201ENST00000621445 119 ntBASIC17.33■□□□□ 0.36
HLA-DQB2P05538 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 PCDHB17P-201ENST00000539533 2393 ntBASIC17.33■□□□□ 0.36
HLA-DQB2P05538 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HLA-DQB2P05538 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 AC011676.5-201ENST00000624864 2660 ntBASIC17.32■□□□□ 0.36
HLA-DQB2P05538 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 RPS2P28-201ENST00000314255 741 ntBASIC17.32■□□□□ 0.36
HLA-DQB2P05538 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 AC087163.2-201ENST00000457299 853 ntBASIC17.32■□□□□ 0.36
HLA-DQB2P05538 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 AC117500.6-201ENST00000624871 588 ntBASIC17.32■□□□□ 0.36
HLA-DQB2P05538 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.32■□□□□ 0.36
HLA-DQB2P05538 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 RNF216P1-203ENST00000404404 2427 ntBASIC17.31■□□□□ 0.36
HLA-DQB2P05538 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 AC092910.1-201ENST00000482027 1129 ntBASIC17.31■□□□□ 0.36
HLA-DQB2P05538 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.31■□□□□ 0.36
HLA-DQB2P05538 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms