Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.48■□□□□ 0.55
CHRNA1P02708 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.48■□□□□ 0.55
CHRNA1P02708 KLF2P3-201ENST00000451977 1087 ntBASIC18.48■□□□□ 0.55
CHRNA1P02708 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.48■□□□□ 0.55
CHRNA1P02708 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CHRNA1P02708 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CHRNA1P02708 AJ011932.1-201ENST00000621707 465 ntBASIC18.48■□□□□ 0.55
CHRNA1P02708 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CHRNA1P02708 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CHRNA1P02708 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 NEFHP1-201ENST00000412845 2629 ntBASIC18.48■□□□□ 0.55
CHRNA1P02708 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.48■□□□□ 0.55
CHRNA1P02708 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHRNA1P02708 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA1P02708 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA1P02708 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA1P02708 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CHRNA1P02708 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA1P02708 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
CHRNA1P02708 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.47■□□□□ 0.55
CHRNA1P02708 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA1P02708 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA1P02708 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA1P02708 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.47■□□□□ 0.55
CHRNA1P02708 MIR943-201ENST00000401286 94 ntBASIC18.47■□□□□ 0.55
CHRNA1P02708 SLC25A39P2-201ENST00000537614 270 ntBASIC18.47■□□□□ 0.55
CHRNA1P02708 AC087641.1-201ENST00000557561 1021 ntBASIC18.47■□□□□ 0.55
CHRNA1P02708 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.47■□□□□ 0.55
CHRNA1P02708 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA1P02708 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CHRNA1P02708 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.47■□□□□ 0.55
CHRNA1P02708 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA1P02708 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.47■□□□□ 0.55
CHRNA1P02708 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA1P02708 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA1P02708 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA1P02708 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHRNA1P02708 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.47■□□□□ 0.55
CHRNA1P02708 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHRNA1P02708 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CHRNA1P02708 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRNA1P02708 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRNA1P02708 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.46■□□□□ 0.55
CHRNA1P02708 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRNA1P02708 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRNA1P02708 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CHRNA1P02708 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.46■□□□□ 0.55
CHRNA1P02708 PMS2P4-201ENST00000412466 1052 ntBASIC18.46■□□□□ 0.55
CHRNA1P02708 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CHRNA1P02708 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CHRNA1P02708 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.46■□□□□ 0.55
CHRNA1P02708 MPDU1-223ENST00000582151 728 ntBASIC18.46■□□□□ 0.55
CHRNA1P02708 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRNA1P02708 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.46■□□□□ 0.55
CHRNA1P02708 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRNA1P02708 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHRNA1P02708 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHRNA1P02708 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRNA1P02708 NOC2LP1-202ENST00000452600 2235 ntBASIC18.46■□□□□ 0.55
CHRNA1P02708 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRNA1P02708 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHRNA1P02708 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRNA1P02708 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.45■□□□□ 0.54
CHRNA1P02708 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.45■□□□□ 0.54
CHRNA1P02708 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRNA1P02708 FRMD8P1-201ENST00000440433 1524 ntBASIC18.45■□□□□ 0.54
CHRNA1P02708 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CHRNA1P02708 AC116353.5-201ENST00000638148 1699 ntBASIC18.45■□□□□ 0.54
CHRNA1P02708 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRNA1P02708 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRNA1P02708 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRNA1P02708 MIR346-201ENST00000362234 95 ntBASIC18.45■□□□□ 0.54
CHRNA1P02708 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CHRNA1P02708 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CHRNA1P02708 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
CHRNA1P02708 AC107890.1-201ENST00000422478 521 ntBASIC18.45■□□□□ 0.54
CHRNA1P02708 INGX-202ENST00000489074 768 ntBASIC18.45■□□□□ 0.54
CHRNA1P02708 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CHRNA1P02708 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRNA1P02708 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.45■□□□□ 0.54
CHRNA1P02708 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.45■□□□□ 0.54
CHRNA1P02708 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.45■□□□□ 0.54
CHRNA1P02708 MIR3909-201ENST00000579518 119 ntBASIC18.45■□□□□ 0.54
CHRNA1P02708 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.45■□□□□ 0.54
CHRNA1P02708 AC008267.7-201ENST00000624570 1194 ntBASIC18.45■□□□□ 0.54
CHRNA1P02708 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.45■□□□□ 0.54
CHRNA1P02708 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CHRNA1P02708 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
CHRNA1P02708 AC131009.4-201ENST00000624048 1740 ntBASIC18.45■□□□□ 0.54
CHRNA1P02708 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms