Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT6AP02538 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.62■□□□□ 0.25
KRT6AP02538 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 AC092068.3-201ENST00000587894 2016 ntBASIC16.62■□□□□ 0.25
KRT6AP02538 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT6AP02538 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
KRT6AP02538 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT6AP02538 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.62■□□□□ 0.25
KRT6AP02538 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
KRT6AP02538 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
KRT6AP02538 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT6AP02538 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 AP000867.3-201ENST00000524675 377 ntBASIC16.62■□□□□ 0.25
KRT6AP02538 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT6AP02538 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.62■□□□□ 0.25
KRT6AP02538 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
KRT6AP02538 AC092329.2-201ENST00000598402 547 ntBASIC16.62■□□□□ 0.25
KRT6AP02538 AC069148.1-201ENST00000608741 768 ntBASIC16.62■□□□□ 0.25
KRT6AP02538 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT6AP02538 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
KRT6AP02538 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT6AP02538 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT6AP02538 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KRT6AP02538 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT6AP02538 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT6AP02538 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT6AP02538 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT6AP02538 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT6AP02538 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT6AP02538 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 AL020989.1-201ENST00000422979 469 ntBASIC16.61■□□□□ 0.25
KRT6AP02538 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
KRT6AP02538 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT6AP02538 AC012615.1-201ENST00000565797 1299 ntBASIC16.61■□□□□ 0.25
KRT6AP02538 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.61■□□□□ 0.25
KRT6AP02538 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT6AP02538 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
KRT6AP02538 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT6AP02538 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT6AP02538 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
KRT6AP02538 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT6AP02538 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT6AP02538 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT6AP02538 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT6AP02538 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KRT6AP02538 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT6AP02538 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
KRT6AP02538 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT6AP02538 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
KRT6AP02538 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
KRT6AP02538 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.6■□□□□ 0.25
KRT6AP02538 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
KRT6AP02538 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
KRT6AP02538 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.6■□□□□ 0.25
KRT6AP02538 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
KRT6AP02538 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms