Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.35■□□□□ 0.85
MBD4O95243 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.35■□□□□ 0.85
MBD4O95243 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.35■□□□□ 0.85
MBD4O95243 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC20.35■□□□□ 0.85
MBD4O95243 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.35■□□□□ 0.85
MBD4O95243 AC007064.4-201ENST00000637740 555 ntBASIC20.35■□□□□ 0.85
MBD4O95243 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.35■□□□□ 0.85
MBD4O95243 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
MBD4O95243 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.35■□□□□ 0.85
MBD4O95243 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.35■□□□□ 0.85
MBD4O95243 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
MBD4O95243 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
MBD4O95243 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.34■□□□□ 0.85
MBD4O95243 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
MBD4O95243 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.34■□□□□ 0.85
MBD4O95243 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.34■□□□□ 0.85
MBD4O95243 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.34■□□□□ 0.85
MBD4O95243 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.34■□□□□ 0.85
MBD4O95243 RPSAP43-201ENST00000402237 625 ntBASIC20.34■□□□□ 0.85
MBD4O95243 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.34■□□□□ 0.85
MBD4O95243 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 UPF3AP3-201ENST00000420996 769 ntBASIC20.34■□□□□ 0.85
MBD4O95243 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.34■□□□□ 0.85
MBD4O95243 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.34■□□□□ 0.85
MBD4O95243 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.34■□□□□ 0.85
MBD4O95243 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.34■□□□□ 0.85
MBD4O95243 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.34■□□□□ 0.85
MBD4O95243 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
MBD4O95243 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
MBD4O95243 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
MBD4O95243 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.34■□□□□ 0.85
MBD4O95243 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.34■□□□□ 0.85
MBD4O95243 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MBD4O95243 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
MBD4O95243 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.33■□□□□ 0.85
MBD4O95243 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
MBD4O95243 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.33■□□□□ 0.85
MBD4O95243 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MBD4O95243 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.33■□□□□ 0.85
MBD4O95243 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MBD4O95243 AC092068.3-201ENST00000587894 2016 ntBASIC20.33■□□□□ 0.85
MBD4O95243 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MBD4O95243 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MBD4O95243 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.33■□□□□ 0.85
MBD4O95243 DNAJB3-201ENST00000446806 729 ntBASIC20.33■□□□□ 0.85
MBD4O95243 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
MBD4O95243 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
MBD4O95243 ALG1L5P-201ENST00000482043 771 ntBASIC20.33■□□□□ 0.85
MBD4O95243 MMP17-203ENST00000535004 719 ntTSL 3 BASIC20.33■□□□□ 0.85
MBD4O95243 AC124947.2-201ENST00000547118 1133 ntBASIC20.33■□□□□ 0.85
MBD4O95243 MTDHP5-201ENST00000598980 586 ntBASIC20.33■□□□□ 0.85
MBD4O95243 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.33■□□□□ 0.85
MBD4O95243 AC006538.3-201ENST00000612495 578 ntBASIC20.33■□□□□ 0.85
MBD4O95243 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
MBD4O95243 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MBD4O95243 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MBD4O95243 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MBD4O95243 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MBD4O95243 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MBD4O95243 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD4O95243 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD4O95243 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.32■□□□□ 0.84
MBD4O95243 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD4O95243 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
MBD4O95243 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.32■□□□□ 0.84
MBD4O95243 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MBD4O95243 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD4O95243 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.32■□□□□ 0.84
MBD4O95243 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MBD4O95243 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
MBD4O95243 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD4O95243 MIR1233-2-201ENST00000408138 82 ntBASIC20.32■□□□□ 0.84
MBD4O95243 MIR1233-1-201ENST00000408722 82 ntBASIC20.32■□□□□ 0.84
MBD4O95243 AC112482.1-201ENST00000492080 688 ntBASIC20.32■□□□□ 0.84
MBD4O95243 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.32■□□□□ 0.84
MBD4O95243 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD4O95243 AL078644.1-201ENST00000609881 752 ntBASIC20.32■□□□□ 0.84
MBD4O95243 AC139530.3-201ENST00000620344 690 ntBASIC20.32■□□□□ 0.84
MBD4O95243 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD4O95243 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD4O95243 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
MBD4O95243 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD4O95243 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms