Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NKX2-2O95096 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
NKX2-2O95096 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NKX2-2O95096 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
NKX2-2O95096 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NKX2-2O95096 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NKX2-2O95096 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.77■□□□□ 0.12
NKX2-2O95096 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.77■□□□□ 0.12
NKX2-2O95096 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC15.77■□□□□ 0.12
NKX2-2O95096 AC136632.2-201ENST00000512891 861 ntBASIC15.77■□□□□ 0.12
NKX2-2O95096 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
NKX2-2O95096 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.77■□□□□ 0.12
NKX2-2O95096 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.77■□□□□ 0.12
NKX2-2O95096 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.77■□□□□ 0.12
NKX2-2O95096 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NKX2-2O95096 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
NKX2-2O95096 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NKX2-2O95096 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.77■□□□□ 0.11
NKX2-2O95096 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.77■□□□□ 0.11
NKX2-2O95096 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NKX2-2O95096 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NKX2-2O95096 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
NKX2-2O95096 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NKX2-2O95096 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NKX2-2O95096 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.77■□□□□ 0.11
NKX2-2O95096 PI4KAP1-204ENST00000612579 1703 ntBASIC15.77■□□□□ 0.11
NKX2-2O95096 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
NKX2-2O95096 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.76■□□□□ 0.11
NKX2-2O95096 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.76■□□□□ 0.11
NKX2-2O95096 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
NKX2-2O95096 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.76■□□□□ 0.11
NKX2-2O95096 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
NKX2-2O95096 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 RPS2P28-201ENST00000314255 741 ntBASIC15.76■□□□□ 0.11
NKX2-2O95096 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.76■□□□□ 0.11
NKX2-2O95096 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.76■□□□□ 0.11
NKX2-2O95096 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.76■□□□□ 0.11
NKX2-2O95096 RPS15P9-201ENST00000494093 319 ntBASIC15.76■□□□□ 0.11
NKX2-2O95096 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.76■□□□□ 0.11
NKX2-2O95096 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.76■□□□□ 0.11
NKX2-2O95096 AP002469.2-201ENST00000531724 424 ntBASIC15.76■□□□□ 0.11
NKX2-2O95096 AL160237.2-201ENST00000556165 472 ntBASIC15.76■□□□□ 0.11
NKX2-2O95096 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.76■□□□□ 0.11
NKX2-2O95096 AC105339.3-201ENST00000560043 636 ntBASIC15.76■□□□□ 0.11
NKX2-2O95096 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.76■□□□□ 0.11
NKX2-2O95096 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
NKX2-2O95096 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.76■□□□□ 0.11
NKX2-2O95096 AC148477.8-201ENST00000624298 468 ntBASIC15.76■□□□□ 0.11
NKX2-2O95096 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC15.76■□□□□ 0.11
NKX2-2O95096 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.76■□□□□ 0.11
NKX2-2O95096 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.76■□□□□ 0.11
NKX2-2O95096 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC15.76■□□□□ 0.11
NKX2-2O95096 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.76■□□□□ 0.11
NKX2-2O95096 AC078925.2-201ENST00000624013 1973 ntBASIC15.76■□□□□ 0.11
NKX2-2O95096 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NKX2-2O95096 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NKX2-2O95096 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.76■□□□□ 0.11
NKX2-2O95096 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NKX2-2O95096 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.75■□□□□ 0.11
NKX2-2O95096 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NKX2-2O95096 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.75■□□□□ 0.11
NKX2-2O95096 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.75■□□□□ 0.11
NKX2-2O95096 AC087163.2-201ENST00000457299 853 ntBASIC15.75■□□□□ 0.11
NKX2-2O95096 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
NKX2-2O95096 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.75■□□□□ 0.11
NKX2-2O95096 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.75■□□□□ 0.11
NKX2-2O95096 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.75■□□□□ 0.11
NKX2-2O95096 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.75■□□□□ 0.11
NKX2-2O95096 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.75■□□□□ 0.11
NKX2-2O95096 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NKX2-2O95096 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms