Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH4O75427 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH4O75427 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.79■□□□□ 0.44
LRCH4O75427 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.79■□□□□ 0.44
LRCH4O75427 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
LRCH4O75427 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH4O75427 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH4O75427 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH4O75427 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRCH4O75427 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.78■□□□□ 0.44
LRCH4O75427 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LRCH4O75427 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
LRCH4O75427 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.78■□□□□ 0.44
LRCH4O75427 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
LRCH4O75427 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.78■□□□□ 0.44
LRCH4O75427 AC124067.4-201ENST00000519691 2379 ntBASIC17.78■□□□□ 0.44
LRCH4O75427 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.78■□□□□ 0.44
LRCH4O75427 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.78■□□□□ 0.44
LRCH4O75427 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.78■□□□□ 0.44
LRCH4O75427 EMBP1-201ENST00000458200 901 ntBASIC17.78■□□□□ 0.44
LRCH4O75427 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LRCH4O75427 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.78■□□□□ 0.44
LRCH4O75427 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.78■□□□□ 0.44
LRCH4O75427 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.78■□□□□ 0.44
LRCH4O75427 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.78■□□□□ 0.44
LRCH4O75427 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.78■□□□□ 0.44
LRCH4O75427 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LRCH4O75427 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
LRCH4O75427 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
LRCH4O75427 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.78■□□□□ 0.44
LRCH4O75427 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LRCH4O75427 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRCH4O75427 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.77■□□□□ 0.44
LRCH4O75427 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
LRCH4O75427 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.77■□□□□ 0.44
LRCH4O75427 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.77■□□□□ 0.44
LRCH4O75427 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.77■□□□□ 0.44
LRCH4O75427 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.77■□□□□ 0.44
LRCH4O75427 ELK2BP-201ENST00000415014 1224 ntBASIC17.77■□□□□ 0.44
LRCH4O75427 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.77■□□□□ 0.44
LRCH4O75427 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.77■□□□□ 0.44
LRCH4O75427 PAWRP1-201ENST00000451083 565 ntBASIC17.77■□□□□ 0.44
LRCH4O75427 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.77■□□□□ 0.44
LRCH4O75427 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.77■□□□□ 0.44
LRCH4O75427 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.77■□□□□ 0.44
LRCH4O75427 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.77■□□□□ 0.44
LRCH4O75427 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 TP73-AS1-207ENST00000624167 988 ntBASIC17.77■□□□□ 0.44
LRCH4O75427 AC107918.4-202ENST00000641623 219 ntBASIC17.77■□□□□ 0.44
LRCH4O75427 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 AC006504.4-201ENST00000592118 1568 ntBASIC17.77■□□□□ 0.44
LRCH4O75427 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRCH4O75427 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.77■□□□□ 0.44
LRCH4O75427 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRCH4O75427 AL118508.1-201ENST00000613502 2345 ntBASIC17.77■□□□□ 0.43
LRCH4O75427 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRCH4O75427 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRCH4O75427 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRCH4O75427 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRCH4O75427 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.77■□□□□ 0.43
LRCH4O75427 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRCH4O75427 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LRCH4O75427 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
LRCH4O75427 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.76■□□□□ 0.43
LRCH4O75427 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRCH4O75427 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms