Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
LCMT2O60294 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCMT2O60294 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCMT2O60294 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCMT2O60294 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LCMT2O60294 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LCMT2O60294 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.36■□□□□ 0.21
LCMT2O60294 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.36■□□□□ 0.21
LCMT2O60294 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCMT2O60294 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCMT2O60294 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
LCMT2O60294 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCMT2O60294 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LCMT2O60294 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.36■□□□□ 0.21
LCMT2O60294 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LCMT2O60294 IGHV3-22-201ENST00000520721 359 ntBASIC16.36■□□□□ 0.21
LCMT2O60294 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.36■□□□□ 0.21
LCMT2O60294 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.36■□□□□ 0.21
LCMT2O60294 AC005593.1-201ENST00000624894 515 ntBASIC16.36■□□□□ 0.21
LCMT2O60294 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCMT2O60294 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCMT2O60294 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCMT2O60294 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.36■□□□□ 0.21
LCMT2O60294 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCMT2O60294 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCMT2O60294 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LCMT2O60294 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCMT2O60294 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.36■□□□□ 0.21
LCMT2O60294 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCMT2O60294 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.36■□□□□ 0.21
LCMT2O60294 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LCMT2O60294 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.35■□□□□ 0.21
LCMT2O60294 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.35■□□□□ 0.21
LCMT2O60294 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
LCMT2O60294 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.35■□□□□ 0.21
LCMT2O60294 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.35■□□□□ 0.21
LCMT2O60294 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.35■□□□□ 0.21
LCMT2O60294 IGHV3-65-201ENST00000523210 341 ntBASIC16.35■□□□□ 0.21
LCMT2O60294 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.35■□□□□ 0.21
LCMT2O60294 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.35■□□□□ 0.21
LCMT2O60294 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.35■□□□□ 0.21
LCMT2O60294 DUX4L17-201ENST00000557360 1267 ntBASIC16.35■□□□□ 0.21
LCMT2O60294 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.35■□□□□ 0.21
LCMT2O60294 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 AC008667.4-201ENST00000607370 168 ntBASIC16.35■□□□□ 0.21
LCMT2O60294 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.35■□□□□ 0.21
LCMT2O60294 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.35■□□□□ 0.21
LCMT2O60294 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.35■□□□□ 0.21
LCMT2O60294 PGM5P2-202ENST00000637225 1043 ntBASIC16.35■□□□□ 0.21
LCMT2O60294 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.35■□□□□ 0.21
LCMT2O60294 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LCMT2O60294 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LCMT2O60294 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.35■□□□□ 0.21
LCMT2O60294 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LCMT2O60294 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.34■□□□□ 0.21
LCMT2O60294 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.34■□□□□ 0.21
LCMT2O60294 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCMT2O60294 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LCMT2O60294 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.34■□□□□ 0.21
LCMT2O60294 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LCMT2O60294 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCMT2O60294 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.34■□□□□ 0.21
LCMT2O60294 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.34■□□□□ 0.21
LCMT2O60294 RNA5SP415-201ENST00000517246 115 ntBASIC16.34■□□□□ 0.21
LCMT2O60294 UNC93B6-202ENST00000528242 690 ntBASIC16.34■□□□□ 0.21
LCMT2O60294 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.34■□□□□ 0.21
LCMT2O60294 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
LCMT2O60294 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
LCMT2O60294 PCDHA12-202ENST00000613593 2588 ntBASIC16.34■□□□□ 0.21
LCMT2O60294 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LCMT2O60294 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCMT2O60294 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LCMT2O60294 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCMT2O60294 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LCMT2O60294 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCMT2O60294 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCMT2O60294 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCMT2O60294 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.34■□□□□ 0.21
LCMT2O60294 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LCMT2O60294 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LCMT2O60294 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
LCMT2O60294 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LCMT2O60294 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LCMT2O60294 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms