Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC14.01□□□□□ -0.17
SSSCA1O60232 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.01□□□□□ -0.17
SSSCA1O60232 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.01□□□□□ -0.17
SSSCA1O60232 ID1-201ENST00000376105 1233 ntBASIC14.01□□□□□ -0.17
SSSCA1O60232 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
SSSCA1O60232 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.01□□□□□ -0.17
SSSCA1O60232 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC14.01□□□□□ -0.17
SSSCA1O60232 AP000525.1-201ENST00000608286 694 ntBASIC14.01□□□□□ -0.17
SSSCA1O60232 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
SSSCA1O60232 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.01□□□□□ -0.17
SSSCA1O60232 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.01□□□□□ -0.17
SSSCA1O60232 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.01□□□□□ -0.17
SSSCA1O60232 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.01□□□□□ -0.17
SSSCA1O60232 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.01□□□□□ -0.17
SSSCA1O60232 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.01□□□□□ -0.17
SSSCA1O60232 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
SSSCA1O60232 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SSSCA1O60232 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
SSSCA1O60232 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
SSSCA1O60232 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14□□□□□ -0.17
SSSCA1O60232 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14□□□□□ -0.17
SSSCA1O60232 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14□□□□□ -0.17
SSSCA1O60232 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
SSSCA1O60232 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14□□□□□ -0.17
SSSCA1O60232 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14□□□□□ -0.17
SSSCA1O60232 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14□□□□□ -0.17
SSSCA1O60232 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14□□□□□ -0.17
SSSCA1O60232 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14□□□□□ -0.17
SSSCA1O60232 AC233702.5-201ENST00000584107 538 ntBASIC14□□□□□ -0.17
SSSCA1O60232 AC004263.2-201ENST00000617183 678 ntBASIC14□□□□□ -0.17
SSSCA1O60232 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC14□□□□□ -0.17
SSSCA1O60232 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14□□□□□ -0.17
SSSCA1O60232 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14□□□□□ -0.17
SSSCA1O60232 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SSSCA1O60232 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SSSCA1O60232 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.99□□□□□ -0.17
SSSCA1O60232 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SSSCA1O60232 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.99□□□□□ -0.17
SSSCA1O60232 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.99□□□□□ -0.17
SSSCA1O60232 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.99□□□□□ -0.17
SSSCA1O60232 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.99□□□□□ -0.17
SSSCA1O60232 FITM1-202ENST00000559294 800 ntBASIC13.99□□□□□ -0.17
SSSCA1O60232 NEK4P2-201ENST00000580004 1012 ntBASIC13.99□□□□□ -0.17
SSSCA1O60232 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC13.99□□□□□ -0.17
SSSCA1O60232 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SSSCA1O60232 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC13.99□□□□□ -0.17
SSSCA1O60232 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SSSCA1O60232 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SSSCA1O60232 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
SSSCA1O60232 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SSSCA1O60232 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms