Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRGAP3O43295 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRGAP3O43295 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
SRGAP3O43295 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
SRGAP3O43295 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRGAP3O43295 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC21.19■□□□□ 0.98
SRGAP3O43295 AL591424.1-201ENST00000442569 1213 ntBASIC21.19■□□□□ 0.98
SRGAP3O43295 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.19■□□□□ 0.98
SRGAP3O43295 KRT18P3-201ENST00000451602 1288 ntBASIC21.19■□□□□ 0.98
SRGAP3O43295 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.19■□□□□ 0.98
SRGAP3O43295 AC107918.2-201ENST00000530817 355 ntBASIC21.19■□□□□ 0.98
SRGAP3O43295 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.19■□□□□ 0.98
SRGAP3O43295 REXO1L3P-201ENST00000622202 1288 ntBASIC21.19■□□□□ 0.98
SRGAP3O43295 AC080080.1-201ENST00000625121 2420 ntBASIC21.19■□□□□ 0.98
SRGAP3O43295 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRGAP3O43295 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRGAP3O43295 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.19■□□□□ 0.98
SRGAP3O43295 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRGAP3O43295 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SRGAP3O43295 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
SRGAP3O43295 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRGAP3O43295 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.19■□□□□ 0.98
SRGAP3O43295 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC21.19■□□□□ 0.98
SRGAP3O43295 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRGAP3O43295 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRGAP3O43295 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SRGAP3O43295 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC21.18■□□□□ 0.98
SRGAP3O43295 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SRGAP3O43295 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SRGAP3O43295 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SRGAP3O43295 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRGAP3O43295 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.18■□□□□ 0.98
SRGAP3O43295 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SRGAP3O43295 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRGAP3O43295 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRGAP3O43295 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC21.18■□□□□ 0.98
SRGAP3O43295 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SRGAP3O43295 ATP6V0CP3-201ENST00000417255 467 ntBASIC21.18■□□□□ 0.98
SRGAP3O43295 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
SRGAP3O43295 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC21.18■□□□□ 0.98
SRGAP3O43295 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.18■□□□□ 0.98
SRGAP3O43295 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRGAP3O43295 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRGAP3O43295 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRGAP3O43295 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRGAP3O43295 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SRGAP3O43295 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.18■□□□□ 0.98
SRGAP3O43295 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC21.18■□□□□ 0.98
SRGAP3O43295 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.18■□□□□ 0.98
SRGAP3O43295 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC21.18■□□□□ 0.98
SRGAP3O43295 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRGAP3O43295 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
SRGAP3O43295 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRGAP3O43295 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRGAP3O43295 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SRGAP3O43295 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC21.17■□□□□ 0.98
SRGAP3O43295 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRGAP3O43295 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRGAP3O43295 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRGAP3O43295 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRGAP3O43295 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRGAP3O43295 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.17■□□□□ 0.98
SRGAP3O43295 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRGAP3O43295 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC21.17■□□□□ 0.98
SRGAP3O43295 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
SRGAP3O43295 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.17■□□□□ 0.98
SRGAP3O43295 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SRGAP3O43295 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRGAP3O43295 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRGAP3O43295 CYP51A1P2-201ENST00000419457 1499 ntBASIC21.17■□□□□ 0.98
SRGAP3O43295 FOS-208ENST00000555686 1496 ntTSL 2 BASIC21.17■□□□□ 0.98
SRGAP3O43295 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRGAP3O43295 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC21.17■□□□□ 0.98
SRGAP3O43295 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRGAP3O43295 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC21.17■□□□□ 0.98
SRGAP3O43295 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC21.17■□□□□ 0.98
SRGAP3O43295 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.17■□□□□ 0.98
SRGAP3O43295 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRGAP3O43295 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.17■□□□□ 0.98
SRGAP3O43295 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP3O43295 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SRGAP3O43295 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
SRGAP3O43295 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP3O43295 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC21.16■□□□□ 0.98
SRGAP3O43295 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP3O43295 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP3O43295 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP3O43295 AC129492.6-201ENST00000611383 1305 ntBASIC21.16■□□□□ 0.98
SRGAP3O43295 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.16■□□□□ 0.98
SRGAP3O43295 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SRGAP3O43295 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.16■□□□□ 0.98
SRGAP3O43295 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP3O43295 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC21.16■□□□□ 0.98
SRGAP3O43295 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC21.16■□□□□ 0.98
SRGAP3O43295 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.16■□□□□ 0.98
SRGAP3O43295 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP3O43295 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP3O43295 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRGAP3O43295 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SRGAP3O43295 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms