Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH17O14917 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
PCDH17O14917 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCDH17O14917 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH17O14917 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH17O14917 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDH17O14917 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH17O14917 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDH17O14917 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDH17O14917 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH17O14917 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH17O14917 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDH17O14917 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.37■□□□□ 0.21
PCDH17O14917 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH17O14917 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PCDH17O14917 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH17O14917 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.37■□□□□ 0.21
PCDH17O14917 STK19B-204ENST00000512515 211 ntBASIC16.37■□□□□ 0.21
PCDH17O14917 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
PCDH17O14917 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH17O14917 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.37■□□□□ 0.21
PCDH17O14917 AC139530.3-201ENST00000620344 690 ntBASIC16.37■□□□□ 0.21
PCDH17O14917 AC116407.3-201ENST00000623905 1129 ntBASIC16.37■□□□□ 0.21
PCDH17O14917 AC132938.5-201ENST00000624980 1813 ntBASIC16.37■□□□□ 0.21
PCDH17O14917 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDH17O14917 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH17O14917 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH17O14917 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH17O14917 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH17O14917 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDH17O14917 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH17O14917 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
PCDH17O14917 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PCDH17O14917 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH17O14917 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH17O14917 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
PCDH17O14917 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
PCDH17O14917 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
PCDH17O14917 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
PCDH17O14917 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDH17O14917 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDH17O14917 KRT18P13-201ENST00000400056 1290 ntBASIC16.36■□□□□ 0.21
PCDH17O14917 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH17O14917 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDH17O14917 IGHV3-22-201ENST00000520721 359 ntBASIC16.36■□□□□ 0.21
PCDH17O14917 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH17O14917 KRT18P58-201ENST00000527480 1120 ntBASIC16.36■□□□□ 0.21
PCDH17O14917 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH17O14917 AC106730.1-201ENST00000566722 1090 ntBASIC16.36■□□□□ 0.21
PCDH17O14917 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDH17O14917 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDH17O14917 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH17O14917 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
PCDH17O14917 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH17O14917 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH17O14917 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDH17O14917 AC243591.1-201ENST00000452967 1364 ntBASIC16.36■□□□□ 0.21
PCDH17O14917 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH17O14917 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH17O14917 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH17O14917 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PCDH17O14917 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
PCDH17O14917 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 BX005266.1-201ENST00000473402 457 ntBASIC16.35■□□□□ 0.21
PCDH17O14917 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDH17O14917 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.35■□□□□ 0.21
PCDH17O14917 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDH17O14917 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDH17O14917 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDH17O14917 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PCDH17O14917 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms