Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 BTNL10-201ENST00000595971 695 ntBASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 WFDC1-204ENST00000613603 549 ntBASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TMEM88BA6NKF7 AC073592.3-201ENST00000625118 1834 ntBASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 MAX-210ENST00000555419 765 ntTSL 5 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 AC021097.1-201ENST00000607902 574 ntBASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 AC093726.1-201ENST00000608064 963 ntBASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TMEM88BA6NKF7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 AC098850.1-201ENST00000419919 790 ntBASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 AC023310.3-201ENST00000557027 670 ntBASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 AC100756.1-201ENST00000562736 682 ntBASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 AC138749.3-201ENST00000567691 622 ntBASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 AC116165.1-201ENST00000611806 668 ntBASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 AL033527.5-201ENST00000641382 801 ntBASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TMEM88BA6NKF7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 AC093525.8-201ENST00000624099 1342 ntBASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 CTBP2P5-201ENST00000454986 1264 ntBASIC19.6■□□□□ 0.73
TMEM88BA6NKF7 AC108725.1-201ENST00000495472 409 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms