Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 LAGE3P1-201ENST00000425356 484 ntBASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 AC079781.3-201ENST00000449110 356 ntBASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 AL139424.1-201ENST00000607572 797 ntBASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 AC004706.3-202ENST00000621574 984 ntBASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 AC107918.4-202ENST00000641623 219 ntBASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB13Q9Y5F0 PCDHA12-202ENST00000613593 2588 ntBASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 OR6D1P-203ENST00000641209 4860 ntBASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 AF186996.4-201ENST00000467186 377 ntBASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 AL031008.1-201ENST00000619963 541 ntBASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 TP73-AS1-207ENST00000624167 988 ntBASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 AL590787.1-201ENST00000568856 1315 ntBASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHB13Q9Y5F0 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 KRT18P67-201ENST00000432816 1264 ntBASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 OR7E14P-202ENST00000530490 1290 ntBASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 AC006557.2-201ENST00000592985 1240 ntBASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 AC104692.2-201ENST00000603054 253 ntBASIC18.94■□□□□ 0.62
PCDHB13Q9Y5F0 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms