Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 SLC25A6P2-201ENST00000497974 877 ntBASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 AL031432.2-201ENST00000566714 459 ntBASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 AL928711.1-201ENST00000570165 459 ntBASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CTDP1Q9Y5B0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 AC027796.2-201ENST00000575326 344 ntBASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CTDP1Q9Y5B0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 AC112191.1-201ENST00000523689 701 ntBASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 ACTL9-202ENST00000612068 1252 ntBASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC19.74■□□□□ 0.75
CTDP1Q9Y5B0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTDP1Q9Y5B0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTDP1Q9Y5B0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.72■□□□□ 0.75
CTDP1Q9Y5B0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.72■□□□□ 0.75
CTDP1Q9Y5B0 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.72■□□□□ 0.75
CTDP1Q9Y5B0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms