Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 AC005332.1-201ENST00000577698 1310 ntBASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
HHLA3Q9XRX5 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
HHLA3Q9XRX5 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
HHLA3Q9XRX5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
HHLA3Q9XRX5 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
HHLA3Q9XRX5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
HHLA3Q9XRX5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.58□□□□□ -0.39
HHLA3Q9XRX5 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
HHLA3Q9XRX5 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.58□□□□□ -0.39
HHLA3Q9XRX5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
HHLA3Q9XRX5 CYP2T1P-202ENST00000641596 2535 ntBASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 ARMC10P1-201ENST00000313754 855 ntBASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 AC011840.4-201ENST00000578471 627 ntBASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 AL121672.3-201ENST00000608644 468 ntBASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 AC124864.1-201ENST00000623408 392 ntBASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 VPS72-207ENST00000640458 689 ntTSL 5 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 AC009949.1-201ENST00000623048 1830 ntBASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
HHLA3Q9XRX5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 TBC1D3P5-201ENST00000579401 1545 ntBASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 AL513523.2-202ENST00000427283 2040 ntBASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 MIR1224-201ENST00000408193 85 ntBASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 PCED1CP-201ENST00000419887 785 ntBASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 PTK2-216ENST00000519881 863 ntTSL 3 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC12.57□□□□□ -0.4
HHLA3Q9XRX5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms