Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 FO538757.1-201ENST00000623083 1397 ntBASIC19.63■□□□□ 0.73
PNMA3Q9UL41 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 RN7SL204P-201ENST00000582831 262 ntBASIC19.63■□□□□ 0.73
PNMA3Q9UL41 AL158211.3-201ENST00000607385 239 ntBASIC19.63■□□□□ 0.73
PNMA3Q9UL41 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 RAB34-224ENST00000636513 888 ntTSL 5 BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 AC090164.3-201ENST00000610780 2143 ntBASIC19.63■□□□□ 0.73
PNMA3Q9UL41 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PNMA3Q9UL41 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 AL353732.1-201ENST00000569618 1459 ntBASIC19.62■□□□□ 0.73
PNMA3Q9UL41 FZD10-202ENST00000539839 3282 ntBASIC19.62■□□□□ 0.73
PNMA3Q9UL41 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 HCG4-201ENST00000418983 998 ntBASIC19.62■□□□□ 0.73
PNMA3Q9UL41 TREML5P-201ENST00000421694 576 ntBASIC19.62■□□□□ 0.73
PNMA3Q9UL41 SPDYE14P-201ENST00000442619 822 ntBASIC19.62■□□□□ 0.73
PNMA3Q9UL41 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PNMA3Q9UL41 AC008677.1-201ENST00000519230 1561 ntBASIC19.61■□□□□ 0.73
PNMA3Q9UL41 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 WASH6P-202ENST00000359512 1437 ntBASIC19.61■□□□□ 0.73
PNMA3Q9UL41 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 SLC25A39P2-201ENST00000537614 270 ntBASIC19.61■□□□□ 0.73
PNMA3Q9UL41 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 AC012645.4-201ENST00000610691 1061 ntBASIC19.61■□□□□ 0.73
PNMA3Q9UL41 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 AL390754.1-201ENST00000619088 582 ntBASIC19.61■□□□□ 0.73
PNMA3Q9UL41 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PNMA3Q9UL41 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PNMA3Q9UL41 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms