Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 PTCHD3P3-201ENST00000403073 906 ntBASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 YBX1P5-201ENST00000509441 847 ntBASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 MIR4469-201ENST00000583919 79 ntBASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HDAC6Q9UBN7 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 IGLL3P-201ENST00000412472 434 ntBASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 AP001094.4-201ENST00000579008 2176 ntBASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
HDAC6Q9UBN7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 GPR89P-201ENST00000407924 1495 ntBASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 MRPL20P1-201ENST00000400819 433 ntBASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 LINC00982-205ENST00000420957 435 ntBASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 AL353135.1-201ENST00000606729 504 ntBASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 C20orf181-201ENST00000623918 480 ntBASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 HCG11-201ENST00000411553 5696 ntBASIC19.36■□□□□ 0.69
HDAC6Q9UBN7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HDAC6Q9UBN7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms